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MIR550A3 (microRNA 550a-3)

Identity

Alias_symbol (synonym)hsa-mir-550a-3
Other aliasmir-550a-3
HGNC (Hugo) MIR550A3
LocusID (NCBI) 100616354
Atlas_Id 69848
Location 7p14.3  [Link to chromosome band 7p14]
Location_base_pair Starts at 29680734 and ends at 29680828 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR550A3   41870
Cards
Entrez_Gene (NCBI)MIR550A3  100616354  microRNA 550a-3
Aliasesmir-550a-3
GeneCards (Weizmann)MIR550A3
Ensembl hg19 (Hinxton)ENSG00000212024 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000212024 [Gene_View]  chr7:29680734-29680828 [Contig_View]  MIR550A3 [Vega]
ICGC DataPortalENSG00000212024
TCGA cBioPortalMIR550A3
AceView (NCBI)MIR550A3
Genatlas (Paris)MIR550A3
WikiGenes100616354
SOURCE (Princeton)MIR550A3
Genetics Home Reference (NIH)MIR550A3
miRBaseMIR550A3
dbDEMCMIR550A3
Genomic and cartography
GoldenPath hg38 (UCSC)MIR550A3  -     chr7:29680734-29680828 -  7p14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR550A3  -     7p14.3   [Description]    (hg19-Feb_2009)
EnsemblMIR550A3 - 7p14.3 [CytoView hg19]  MIR550A3 - 7p14.3 [CytoView hg38]
Mapping of homologs : NCBIMIR550A3 [Mapview hg19]  MIR550A3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM609620
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR550A3
Alternative Splicing GalleryENSG00000212024
Gene ExpressionMIR550A3 [ NCBI-GEO ]   MIR550A3 [ EBI - ARRAY_EXPRESS ]   MIR550A3 [ SEEK ]   MIR550A3 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR550A3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616354
GTEX Portal (Tissue expression)MIR550A3
Human Protein AtlasENSG00000212024-MIR550A3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR550A3
DMDM Disease mutations100616354
Blocks (Seattle)MIR550A3
Human Protein Atlas [tissue]ENSG00000212024-MIR550A3 [tissue]
Protein Interaction databases
FunCoupENSG00000212024
BioGRIDMIR550A3
STRING (EMBL)MIR550A3
ZODIACMIR550A3
Ontologies - Pathways
Huge Navigator MIR550A3 [HugePedia]
snp3D : Map Gene to Disease100616354
BioCentury BCIQMIR550A3
ClinGenMIR550A3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616354
Clinical trialMIR550A3
Miscellaneous
canSAR (ICR)MIR550A3 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR550A3
EVEXMIR550A3
GoPubMedMIR550A3
iHOPMIR550A3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 19:59:52 CET 2017

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