Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR550B1 (microRNA 550b-1)

Identity

Alias_symbol (synonym)hsa-mir-550b-1
Other alias-
HGNC (Hugo) MIR550B1
LocusID (NCBI) 100500883
Atlas_Id 69849
Location 7p14.3  [Link to chromosome band 7p14]
Location_base_pair Starts at 30289794 and ends at 30289890 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR550B1   38992
Cards
Entrez_Gene (NCBI)MIR550B1  100500883  microRNA 550b-1
Aliases
GeneCards (Weizmann)MIR550B1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:30289794-30289890 [Contig_View]  MIR550B1 [Vega]
TCGA cBioPortalMIR550B1
AceView (NCBI)MIR550B1
Genatlas (Paris)MIR550B1
WikiGenes100500883
SOURCE (Princeton)MIR550B1
Genetics Home Reference (NIH)MIR550B1
miRBaseMIR550B1
dbDEMCMIR550B1
Genomic and cartography
GoldenPath hg38 (UCSC)MIR550B1  -     chr7:30289794-30289890 -  7p14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR550B1  -     7p14.3   [Description]    (hg19-Feb_2009)
EnsemblMIR550B1 - 7p14.3 [CytoView hg19]  MIR550B1 - 7p14.3 [CytoView hg38]
Mapping of homologs : NCBIMIR550B1 [Mapview hg19]  MIR550B1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR550B1
Gene ExpressionMIR550B1 [ NCBI-GEO ]   MIR550B1 [ EBI - ARRAY_EXPRESS ]   MIR550B1 [ SEEK ]   MIR550B1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR550B1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100500883
GTEX Portal (Tissue expression)MIR550B1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR550B1
DMDM Disease mutations100500883
Blocks (Seattle)MIR550B1
Protein Interaction databases
BioGRIDMIR550B1
STRING (EMBL)MIR550B1
ZODIACMIR550B1
Ontologies - Pathways
Huge Navigator MIR550B1 [HugePedia]
snp3D : Map Gene to Disease100500883
BioCentury BCIQMIR550B1
ClinGenMIR550B1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100500883
Clinical trialMIR550B1
Miscellaneous
canSAR (ICR)MIR550B1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR550B1
EVEXMIR550B1
GoPubMedMIR550B1
iHOPMIR550B1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:29:24 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.