Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR551B (microRNA 551b)

Identity

Alias_namesMIRN551B
Alias_symbol (synonym)hsa-mir-551b
Other aliasmir-551b
HGNC (Hugo) MIR551B
LocusID (NCBI) 693136
Atlas_Id 55859
Location 3q26.2  [Link to chromosome band 3q26]
Location_base_pair Starts at 168551854 and ends at 168551949 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR551B   32807
Cards
Entrez_Gene (NCBI)MIR551B  693136  microRNA 551b
AliasesMIRN551B; mir-551b
GeneCards (Weizmann)MIR551B
Ensembl hg19 (Hinxton)ENSG00000207717 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207717 [Gene_View]  ENSG00000207717 [Sequence]  chr3:168551854-168551949 [Contig_View]  MIR551B [Vega]
ICGC DataPortalENSG00000207717
TCGA cBioPortalMIR551B
AceView (NCBI)MIR551B
Genatlas (Paris)MIR551B
WikiGenes693136
SOURCE (Princeton)MIR551B
Genetics Home Reference (NIH)MIR551B
miRBaseMIR551B
dbDEMCMIR551B
Genomic and cartography
GoldenPath hg38 (UCSC)MIR551B  -     chr3:168551854-168551949 +  3q26.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR551B  -     3q26.2   [Description]    (hg19-Feb_2009)
EnsemblMIR551B - 3q26.2 [CytoView hg19]  MIR551B - 3q26.2 [CytoView hg38]
Mapping of homologs : NCBIMIR551B [Mapview hg19]  MIR551B [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM609551
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR551B
Alternative Splicing GalleryENSG00000207717
Gene ExpressionMIR551B [ NCBI-GEO ]   MIR551B [ EBI - ARRAY_EXPRESS ]   MIR551B [ SEEK ]   MIR551B [ MEM ]
Gene Expression Viewer (FireBrowse)MIR551B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)693136
GTEX Portal (Tissue expression)MIR551B
Human Protein AtlasENSG00000207717-MIR551B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR551B
DMDM Disease mutations693136
Blocks (Seattle)MIR551B
Human Protein Atlas [tissue]ENSG00000207717-MIR551B [tissue]
Protein Interaction databases
FunCoupENSG00000207717
BioGRIDMIR551B
STRING (EMBL)MIR551B
ZODIACMIR551B
Ontologies - Pathways
Huge Navigator MIR551B [HugePedia]
snp3D : Map Gene to Disease693136
BioCentury BCIQMIR551B
ClinGenMIR551B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD693136
Chemical/Pharm GKB GenePA164722850
Clinical trialMIR551B
Miscellaneous
canSAR (ICR)MIR551B (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR551B
EVEXMIR551B
GoPubMedMIR551B
iHOPMIR551B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 6 11:22:23 CET 2018

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