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MIR553 (microRNA 553)

Identity

Alias_namesMIRN553
Alias_symbol (synonym)hsa-mir-553
Other alias
HGNC (Hugo) MIR553
LocusID (NCBI) 693138
Atlas_Id 69852
Location 1p21.2  [Link to chromosome band 1p21]
Location_base_pair Starts at 100281241 and ends at 100281308 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR553   32809
Cards
Entrez_Gene (NCBI)MIR553  693138  microRNA 553
AliasesMIRN553; hsa-mir-553
GeneCards (Weizmann)MIR553
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:100281241-100281308 [Contig_View]  MIR553 [Vega]
TCGA cBioPortalMIR553
AceView (NCBI)MIR553
Genatlas (Paris)MIR553
WikiGenes693138
SOURCE (Princeton)MIR553
Genetics Home Reference (NIH)MIR553
miRBaseMIR553
dbDEMCMIR553
Genomic and cartography
GoldenPath hg38 (UCSC)MIR553  -     chr1:100281241-100281308 +  1p21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR553  -     1p21.2   [Description]    (hg19-Feb_2009)
EnsemblMIR553 - 1p21.2 [CytoView hg19]  MIR553 - 1p21.2 [CytoView hg38]
Mapping of homologs : NCBIMIR553 [Mapview hg19]  MIR553 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR553
Gene ExpressionMIR553 [ NCBI-GEO ]   MIR553 [ EBI - ARRAY_EXPRESS ]   MIR553 [ SEEK ]   MIR553 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR553 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)693138
GTEX Portal (Tissue expression)MIR553
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR553
DMDM Disease mutations693138
Blocks (Seattle)MIR553
Protein Interaction databases
BioGRIDMIR553
STRING (EMBL)MIR553
ZODIACMIR553
Ontologies - Pathways
Huge Navigator MIR553 [HugePedia]
snp3D : Map Gene to Disease693138
BioCentury BCIQMIR553
ClinGenMIR553
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD693138
Chemical/Pharm GKB GenePA164722852
Clinical trialMIR553
Miscellaneous
canSAR (ICR)MIR553 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR553
EVEXMIR553
GoPubMedMIR553
iHOPMIR553
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:29:44 CEST 2017

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