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MIR554 (microRNA 554)

Identity

Alias_namesMIRN554
Alias_symbol (synonym)hsa-mir-554
Other alias
HGNC (Hugo) MIR554
LocusID (NCBI) 693139
Atlas_Id 69853
Location 1q21.3  [Link to chromosome band 1q21]
Location_base_pair Starts at 151518272 and ends at 151518367 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR554   32810
Cards
Entrez_Gene (NCBI)MIR554  693139  microRNA 554
AliasesMIRN554; hsa-mir-554
GeneCards (Weizmann)MIR554
Ensembl hg19 (Hinxton) [Gene_View]  chr1:151518272-151518367 [Contig_View]  MIR554 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:151518272-151518367 [Contig_View]  MIR554 [Vega]
TCGA cBioPortalMIR554
AceView (NCBI)MIR554
Genatlas (Paris)MIR554
WikiGenes693139
SOURCE (Princeton)MIR554
Genetics Home Reference (NIH)MIR554
miRBaseMIR554
dbDEMCMIR554
Genomic and cartography
GoldenPath hg19 (UCSC)MIR554  -     chr1:151518272-151518367 +  1q21.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR554  -     1q21.3   [Description]    (hg38-Dec_2013)
EnsemblMIR554 - 1q21.3 [CytoView hg19]  MIR554 - 1q21.3 [CytoView hg38]
Mapping of homologs : NCBIMIR554 [Mapview hg19]  MIR554 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)MIR554
Gene ExpressionMIR554 [ NCBI-GEO ]   MIR554 [ EBI - ARRAY_EXPRESS ]   MIR554 [ SEEK ]   MIR554 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR554 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)693139
GTEX Portal (Tissue expression)MIR554
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR554
DMDM Disease mutations693139
Blocks (Seattle)MIR554
Protein Interaction databases
BioGRIDMIR554
STRING (EMBL)MIR554
ZODIACMIR554
Ontologies - Pathways
Huge Navigator MIR554 [HugePedia]
snp3D : Map Gene to Disease693139
BioCentury BCIQMIR554
ClinGenMIR554
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD693139
Chemical/Pharm GKB GenePA164722853
Clinical trialMIR554
Miscellaneous
canSAR (ICR)MIR554 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR554
EVEXMIR554
GoPubMedMIR554
iHOPMIR554
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:31:36 CET 2017

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