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MIR556 (microRNA 556)

Identity

Other aliasMIRN556
hsa-mir-556
mir-556
HGNC (Hugo) MIR556
LocusID (NCBI) 693141
Atlas_Id 56657
Location 1q23.3  [Link to chromosome band 1q23]
Location_base_pair Starts at 162342546 and ends at 162342640 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR556   32812
Cards
Entrez_Gene (NCBI)MIR556  693141  microRNA 556
AliasesMIRN556; hsa-mir-556; mir-556
GeneCards (Weizmann)MIR556
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:162342546-162342640 [Contig_View]  MIR556 [Vega]
TCGA cBioPortalMIR556
AceView (NCBI)MIR556
Genatlas (Paris)MIR556
WikiGenes693141
SOURCE (Princeton)MIR556
Genetics Home Reference (NIH)MIR556
miRBaseMIR556
dbDEMCMIR556
Genomic and cartography
GoldenPath hg38 (UCSC)MIR556  -     chr1:162342546-162342640 +  1q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR556  -     1q23.3   [Description]    (hg19-Feb_2009)
EnsemblMIR556 - 1q23.3 [CytoView hg19]  MIR556 - 1q23.3 [CytoView hg38]
Mapping of homologs : NCBIMIR556 [Mapview hg19]  MIR556 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM609549
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR556
Gene ExpressionMIR556 [ NCBI-GEO ]   MIR556 [ EBI - ARRAY_EXPRESS ]   MIR556 [ SEEK ]   MIR556 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR556 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)693141
GTEX Portal (Tissue expression)MIR556
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR556
DMDM Disease mutations693141
Blocks (Seattle)MIR556
Protein Interaction databases
BioGRIDMIR556
STRING (EMBL)MIR556
ZODIACMIR556
Ontologies - Pathways
Huge Navigator MIR556 [HugePedia]
snp3D : Map Gene to Disease693141
BioCentury BCIQMIR556
ClinGenMIR556
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD693141
Chemical/Pharm GKB GenePA164722855
Clinical trialMIR556
Miscellaneous
canSAR (ICR)MIR556 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR556
EVEXMIR556
GoPubMedMIR556
iHOPMIR556
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:44:30 CEST 2017

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