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MIR557 (microRNA 557)

Identity

Alias_namesMIRN557
Alias_symbol (synonym)hsa-mir-557
Other alias
HGNC (Hugo) MIR557
LocusID (NCBI) 693142
Atlas_Id 69856
Location 1q24.2  [Link to chromosome band 1q24]
Location_base_pair Starts at 168344762 and ends at 168344859 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR557   32813
Cards
Entrez_Gene (NCBI)MIR557  693142  microRNA 557
AliasesMIRN557; hsa-mir-557
GeneCards (Weizmann)MIR557
Ensembl hg19 (Hinxton)ENSG00000207974 [Gene_View]  chr1:168344762-168344859 [Contig_View]  MIR557 [Vega]
Ensembl hg38 (Hinxton)ENSG00000207974 [Gene_View]  chr1:168344762-168344859 [Contig_View]  MIR557 [Vega]
ICGC DataPortalENSG00000207974
TCGA cBioPortalMIR557
AceView (NCBI)MIR557
Genatlas (Paris)MIR557
WikiGenes693142
SOURCE (Princeton)MIR557
Genetics Home Reference (NIH)MIR557
miRBaseMIR557
dbDEMCMIR557
Genomic and cartography
GoldenPath hg19 (UCSC)MIR557  -     chr1:168344762-168344859 +  1q24.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR557  -     1q24.2   [Description]    (hg38-Dec_2013)
EnsemblMIR557 - 1q24.2 [CytoView hg19]  MIR557 - 1q24.2 [CytoView hg38]
Mapping of homologs : NCBIMIR557 [Mapview hg19]  MIR557 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)MIR557
Alternative Splicing GalleryENSG00000207974
Gene ExpressionMIR557 [ NCBI-GEO ]   MIR557 [ EBI - ARRAY_EXPRESS ]   MIR557 [ SEEK ]   MIR557 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR557 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)693142
GTEX Portal (Tissue expression)MIR557
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR557
DMDM Disease mutations693142
Blocks (Seattle)MIR557
Human Protein AtlasENSG00000207974
Protein Interaction databases
FunCoupENSG00000207974
BioGRIDMIR557
STRING (EMBL)MIR557
ZODIACMIR557
Ontologies - Pathways
Huge Navigator MIR557 [HugePedia]
snp3D : Map Gene to Disease693142
BioCentury BCIQMIR557
ClinGenMIR557
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD693142
Chemical/Pharm GKB GenePA164722856
Clinical trialMIR557
Miscellaneous
canSAR (ICR)MIR557 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR557
EVEXMIR557
GoPubMedMIR557
iHOPMIR557
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:31:36 CET 2017

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