Atlas of Genetics and Cytogenetics in Oncology and Haematology

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MIR5582 (microRNA 5582)

Identity

Alias (NCBI)-
HGNC (Hugo) MIR5582
HGNC Alias symbhsa-mir-5582
LocusID (NCBI) 100847020
Atlas_Id 57868
Location 11p11.2  [Link to chromosome band 11p11]
Location_base_pair Starts at 46753125 and ends at 46753192 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MIR5582   43461
Cards
Entrez_Gene (NCBI)MIR5582    microRNA 5582
Aliases
GeneCards (Weizmann)MIR5582
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr11:46753125-46753192 [Contig_View]  MIR5582 [Vega]
TCGA cBioPortalMIR5582
AceView (NCBI)MIR5582
Genatlas (Paris)MIR5582
SOURCE (Princeton)MIR5582
Genetics Home Reference (NIH)MIR5582
miRBaseMIR5582
dbDEMCMIR5582
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5582  -     chr11:46753125-46753192 -  11p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5582  -     11p11.2   [Description]    (hg19-Feb_2009)
GoldenPathMIR5582 - 11p11.2 [CytoView hg19]  MIR5582 - 11p11.2 [CytoView hg38]
genome Data Viewer NCBIMIR5582 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5582
Gene ExpressionMIR5582 [ NCBI-GEO ]   MIR5582 [ EBI - ARRAY_EXPRESS ]   MIR5582 [ SEEK ]   MIR5582 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5582 [ Firebrowse - Broad ]
GenevisibleExpression of MIR5582 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100847020
GTEX Portal (Tissue expression)MIR5582
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5582
Blocks (Seattle)MIR5582
Protein Interaction databases
BioGRIDMIR5582
STRING (EMBL)MIR5582
ZODIACMIR5582
Ontologies - Pathways
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMIR5582
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Mar 25 19:33:47 CET 2021
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