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MIR5582 (microRNA 5582)

Identity

Alias_symbol (synonym)hsa-mir-5582
Other alias-
HGNC (Hugo) MIR5582
LocusID (NCBI) 100847020
Atlas_Id 69862
Location 11p11.2  [Link to chromosome band 11p11]
Location_base_pair Starts at 46753125 and ends at 46753192 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5582   43461
Cards
Entrez_Gene (NCBI)MIR5582  100847020  microRNA 5582
Aliases
GeneCards (Weizmann)MIR5582
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:46753125-46753192 [Contig_View]  MIR5582 [Vega]
TCGA cBioPortalMIR5582
AceView (NCBI)MIR5582
Genatlas (Paris)MIR5582
WikiGenes100847020
SOURCE (Princeton)MIR5582
Genetics Home Reference (NIH)MIR5582
miRBaseMIR5582
dbDEMCMIR5582
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5582  -     chr11:46753125-46753192 -  11p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5582  -     11p11.2   [Description]    (hg19-Feb_2009)
EnsemblMIR5582 - 11p11.2 [CytoView hg19]  MIR5582 - 11p11.2 [CytoView hg38]
Mapping of homologs : NCBIMIR5582 [Mapview hg19]  MIR5582 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5582
Gene ExpressionMIR5582 [ NCBI-GEO ]   MIR5582 [ EBI - ARRAY_EXPRESS ]   MIR5582 [ SEEK ]   MIR5582 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5582 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847020
GTEX Portal (Tissue expression)MIR5582
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5582
DMDM Disease mutations100847020
Blocks (Seattle)MIR5582
Protein Interaction databases
BioGRIDMIR5582
STRING (EMBL)MIR5582
ZODIACMIR5582
Ontologies - Pathways
Huge Navigator MIR5582 [HugePedia]
snp3D : Map Gene to Disease100847020
BioCentury BCIQMIR5582
ClinGenMIR5582
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847020
Clinical trialMIR5582
Miscellaneous
canSAR (ICR)MIR5582 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5582
EVEXMIR5582
GoPubMedMIR5582
iHOPMIR5582
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:59:55 CET 2017

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