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MIR5583-2 (microRNA 5583-2)

Identity

Alias_symbol (synonym)hsa-mir-5583-2
Other alias-
HGNC (Hugo) MIR5583-2
LocusID (NCBI) 100846997
Atlas_Id 69864
Location 18q12.3  [Link to chromosome band 18q12]
Location_base_pair Starts at 39676719 and ends at 39676777 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5583-2   43471
Cards
Entrez_Gene (NCBI)MIR5583-2  100846997  microRNA 5583-2
Aliases
GeneCards (Weizmann)MIR5583-2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr18:39676719-39676777 [Contig_View]  MIR5583-2 [Vega]
TCGA cBioPortalMIR5583-2
AceView (NCBI)MIR5583-2
Genatlas (Paris)MIR5583-2
WikiGenes100846997
SOURCE (Princeton)MIR5583-2
Genetics Home Reference (NIH)MIR5583-2
miRBaseMIR5583-2
dbDEMCMIR5583-2
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5583-2  -     chr18:39676719-39676777 -  18q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5583-2  -     18q12.3   [Description]    (hg19-Feb_2009)
EnsemblMIR5583-2 - 18q12.3 [CytoView hg19]  MIR5583-2 - 18q12.3 [CytoView hg38]
Mapping of homologs : NCBIMIR5583-2 [Mapview hg19]  MIR5583-2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5583-2
Gene ExpressionMIR5583-2 [ NCBI-GEO ]   MIR5583-2 [ EBI - ARRAY_EXPRESS ]   MIR5583-2 [ SEEK ]   MIR5583-2 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5583-2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100846997
GTEX Portal (Tissue expression)MIR5583-2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5583-2
DMDM Disease mutations100846997
Blocks (Seattle)MIR5583-2
Protein Interaction databases
BioGRIDMIR5583-2
STRING (EMBL)MIR5583-2
ZODIACMIR5583-2
Ontologies - Pathways
Huge Navigator MIR5583-2 [HugePedia]
snp3D : Map Gene to Disease100846997
BioCentury BCIQMIR5583-2
ClinGenMIR5583-2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100846997
Clinical trialMIR5583-2
Miscellaneous
canSAR (ICR)MIR5583-2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5583-2
EVEXMIR5583-2
GoPubMedMIR5583-2
iHOPMIR5583-2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:15:52 CET 2017

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