Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR5587 (microRNA 5587)

Identity

Alias_symbol (synonym)hsa-mir-5587
Other alias-
HGNC (Hugo) MIR5587
LocusID (NCBI) 100847028
Atlas_Id 69867
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 535316 and ends at 535368 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5587   43508
Cards
Entrez_Gene (NCBI)MIR5587  100847028  microRNA 5587
Aliases
GeneCards (Weizmann)MIR5587
Ensembl hg19 (Hinxton)ENSG00000266124 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000266124 [Gene_View]  chr16:535316-535368 [Contig_View]  MIR5587 [Vega]
ICGC DataPortalENSG00000266124
TCGA cBioPortalMIR5587
AceView (NCBI)MIR5587
Genatlas (Paris)MIR5587
WikiGenes100847028
SOURCE (Princeton)MIR5587
Genetics Home Reference (NIH)MIR5587
miRBaseMIR5587
dbDEMCMIR5587
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5587  -     chr16:535316-535368 +  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5587  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblMIR5587 - 16p13.3 [CytoView hg19]  MIR5587 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBIMIR5587 [Mapview hg19]  MIR5587 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5587
Alternative Splicing GalleryENSG00000266124
Gene ExpressionMIR5587 [ NCBI-GEO ]   MIR5587 [ EBI - ARRAY_EXPRESS ]   MIR5587 [ SEEK ]   MIR5587 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5587 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847028
GTEX Portal (Tissue expression)MIR5587
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5587
DMDM Disease mutations100847028
Blocks (Seattle)MIR5587
Human Protein AtlasENSG00000266124
Protein Interaction databases
FunCoupENSG00000266124
BioGRIDMIR5587
STRING (EMBL)MIR5587
ZODIACMIR5587
Ontologies - Pathways
Huge Navigator MIR5587 [HugePedia]
snp3D : Map Gene to Disease100847028
BioCentury BCIQMIR5587
ClinGenMIR5587
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847028
Clinical trialMIR5587
Miscellaneous
canSAR (ICR)MIR5587 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5587
EVEXMIR5587
GoPubMedMIR5587
iHOPMIR5587
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:41:44 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.