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MIR5588 (microRNA 5588)

Identity

Alias_symbol (synonym)hsa-mir-5588
Other alias-
HGNC (Hugo) MIR5588
LocusID (NCBI) 100847054
Atlas_Id 69868
Location 3q27.2  [Link to chromosome band 3q27]
Location_base_pair Starts at 185253210 and ends at 185253272 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5588   43505
Cards
Entrez_Gene (NCBI)MIR5588  100847054  microRNA 5588
Aliases
GeneCards (Weizmann)MIR5588
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:185253210-185253272 [Contig_View]  MIR5588 [Vega]
TCGA cBioPortalMIR5588
AceView (NCBI)MIR5588
Genatlas (Paris)MIR5588
WikiGenes100847054
SOURCE (Princeton)MIR5588
Genetics Home Reference (NIH)MIR5588
miRBaseMIR5588
dbDEMCMIR5588
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5588  -     chr3:185253210-185253272 -  3q27.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5588  -     3q27.2   [Description]    (hg19-Feb_2009)
EnsemblMIR5588 - 3q27.2 [CytoView hg19]  MIR5588 - 3q27.2 [CytoView hg38]
Mapping of homologs : NCBIMIR5588 [Mapview hg19]  MIR5588 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5588
Gene ExpressionMIR5588 [ NCBI-GEO ]   MIR5588 [ EBI - ARRAY_EXPRESS ]   MIR5588 [ SEEK ]   MIR5588 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5588 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847054
GTEX Portal (Tissue expression)MIR5588
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5588
DMDM Disease mutations100847054
Blocks (Seattle)MIR5588
Protein Interaction databases
BioGRIDMIR5588
STRING (EMBL)MIR5588
ZODIACMIR5588
Ontologies - Pathways
Huge Navigator MIR5588 [HugePedia]
snp3D : Map Gene to Disease100847054
BioCentury BCIQMIR5588
ClinGenMIR5588
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847054
Clinical trialMIR5588
Miscellaneous
canSAR (ICR)MIR5588 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5588
EVEXMIR5588
GoPubMedMIR5588
iHOPMIR5588
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:29:28 CEST 2017

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