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MIR561 (microRNA 561)

Identity

Alias_namesMIRN561
Alias_symbol (synonym)hsa-mir-561
Other aliasmir-561
HGNC (Hugo) MIR561
LocusID (NCBI) 693146
Atlas_Id 69870
Location 2q32.1  [Link to chromosome band 2q32]
Location_base_pair Starts at 189162219 and ends at 189162315 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR561   32817
Cards
Entrez_Gene (NCBI)MIR561  693146  microRNA 561
AliasesMIRN561; hsa-mir-561; mir-561
GeneCards (Weizmann)MIR561
Ensembl hg19 (Hinxton)ENSG00000207951 [Gene_View]  chr2:189162219-189162315 [Contig_View]  MIR561 [Vega]
Ensembl hg38 (Hinxton)ENSG00000207951 [Gene_View]  chr2:189162219-189162315 [Contig_View]  MIR561 [Vega]
ICGC DataPortalENSG00000207951
TCGA cBioPortalMIR561
AceView (NCBI)MIR561
Genatlas (Paris)MIR561
WikiGenes693146
SOURCE (Princeton)MIR561
Genetics Home Reference (NIH)MIR561
miRBaseMIR561
dbDEMCMIR561
Genomic and cartography
GoldenPath hg19 (UCSC)MIR561  -     chr2:189162219-189162315 +  2q32.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR561  -     2q32.1   [Description]    (hg38-Dec_2013)
EnsemblMIR561 - 2q32.1 [CytoView hg19]  MIR561 - 2q32.1 [CytoView hg38]
Mapping of homologs : NCBIMIR561 [Mapview hg19]  MIR561 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM609550
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_005403 NW_004929305
Consensus coding sequences : CCDS (NCBI)MIR561
Alternative Splicing GalleryENSG00000207951
Gene ExpressionMIR561 [ NCBI-GEO ]   MIR561 [ EBI - ARRAY_EXPRESS ]   MIR561 [ SEEK ]   MIR561 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR561 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)693146
GTEX Portal (Tissue expression)MIR561
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR561
DMDM Disease mutations693146
Blocks (Seattle)MIR561
Human Protein AtlasENSG00000207951
Protein Interaction databases
FunCoupENSG00000207951
BioGRIDMIR561
STRING (EMBL)MIR561
ZODIACMIR561
Ontologies - Pathways
Huge Navigator MIR561 [HugePedia]
snp3D : Map Gene to Disease693146
BioCentury BCIQMIR561
ClinGenMIR561
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD693146
Chemical/Pharm GKB GenePA164722859
Clinical trialMIR561
Miscellaneous
canSAR (ICR)MIR561 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR561
EVEXMIR561
GoPubMedMIR561
iHOPMIR561
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:31:40 CET 2017

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