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MIR5682 (microRNA 5682)

Identity

Alias_symbol (synonym)hsa-mir-5682
Other alias-
HGNC (Hugo) MIR5682
LocusID (NCBI) 100847043
Atlas_Id 76692
Location 3q13.33  [Link to chromosome band 3q13]
Location_base_pair Starts at 121049640 and ends at 121049715 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5682   43477
Cards
Entrez_Gene (NCBI)MIR5682  100847043  microRNA 5682
Aliases
GeneCards (Weizmann)MIR5682
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:121049640-121049715 [Contig_View]  MIR5682 [Vega]
TCGA cBioPortalMIR5682
AceView (NCBI)MIR5682
Genatlas (Paris)MIR5682
WikiGenes100847043
SOURCE (Princeton)MIR5682
Genetics Home Reference (NIH)MIR5682
miRBaseMIR5682
dbDEMCMIR5682
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5682  -     chr3:121049640-121049715 +  3q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5682  -     3q13.33   [Description]    (hg19-Feb_2009)
EnsemblMIR5682 - 3q13.33 [CytoView hg19]  MIR5682 - 3q13.33 [CytoView hg38]
Mapping of homologs : NCBIMIR5682 [Mapview hg19]  MIR5682 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5682
Gene ExpressionMIR5682 [ NCBI-GEO ]   MIR5682 [ EBI - ARRAY_EXPRESS ]   MIR5682 [ SEEK ]   MIR5682 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5682 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847043
GTEX Portal (Tissue expression)MIR5682
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5682
DMDM Disease mutations100847043
Blocks (Seattle)MIR5682
Protein Interaction databases
BioGRIDMIR5682
STRING (EMBL)MIR5682
ZODIACMIR5682
Ontologies - Pathways
Huge Navigator MIR5682 [HugePedia]
snp3D : Map Gene to Disease100847043
BioCentury BCIQMIR5682
ClinGenMIR5682
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847043
Clinical trialMIR5682
Miscellaneous
canSAR (ICR)MIR5682 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5682
EVEXMIR5682
GoPubMedMIR5682
iHOPMIR5682
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:08:26 CET 2017

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