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MIR5684 (microRNA 5684)

Identity

Alias_symbol (synonym)hsa-mir-5684
Other alias-
HGNC (Hugo) MIR5684
LocusID (NCBI) 100847071
Atlas_Id 69877
Location 4q32.3  [Link to chromosome band 4q32]
Location_base_pair Starts at 165426542 and ends at 165630646 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5684   43544
Cards
Entrez_Gene (NCBI)MIR5684  100847071  microRNA 5684
Aliases
GeneCards (Weizmann)MIR5684
Ensembl hg19 (Hinxton)ENSG00000263800 [Gene_View]  chr4:165426542-165630646 [Contig_View]  MIR5684 [Vega]
Ensembl hg38 (Hinxton)ENSG00000263800 [Gene_View]  chr4:165426542-165630646 [Contig_View]  MIR5684 [Vega]
ICGC DataPortalENSG00000263800
TCGA cBioPortalMIR5684
AceView (NCBI)MIR5684
Genatlas (Paris)MIR5684
WikiGenes100847071
SOURCE (Princeton)MIR5684
Genetics Home Reference (NIH)MIR5684
miRBaseMIR5684
dbDEMCMIR5684
Genomic and cartography
GoldenPath hg19 (UCSC)MIR5684  -     chr4:165426542-165630646 +  4q32.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR5684  -     4q32.3   [Description]    (hg38-Dec_2013)
EnsemblMIR5684 - 4q32.3 [CytoView hg19]  MIR5684 - 4q32.3 [CytoView hg38]
Mapping of homologs : NCBIMIR5684 [Mapview hg19]  MIR5684 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929414
Consensus coding sequences : CCDS (NCBI)MIR5684
Alternative Splicing GalleryENSG00000263800
Gene ExpressionMIR5684 [ NCBI-GEO ]   MIR5684 [ EBI - ARRAY_EXPRESS ]   MIR5684 [ SEEK ]   MIR5684 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5684 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847071
GTEX Portal (Tissue expression)MIR5684
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5684
DMDM Disease mutations100847071
Blocks (Seattle)MIR5684
Human Protein AtlasENSG00000263800
Protein Interaction databases
FunCoupENSG00000263800
BioGRIDMIR5684
STRING (EMBL)MIR5684
ZODIACMIR5684
Ontologies - Pathways
Huge Navigator MIR5684 [HugePedia]
snp3D : Map Gene to Disease100847071
BioCentury BCIQMIR5684
ClinGenMIR5684
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847071
Clinical trialMIR5684
Miscellaneous
canSAR (ICR)MIR5684 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5684
EVEXMIR5684
GoPubMedMIR5684
iHOPMIR5684
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:31:42 CET 2017

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