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MIR5685 (microRNA 5685)

Identity

Alias (NCBI)-
HGNC (Hugo) MIR5685
HGNC Alias symbhsa-mir-5685
LocusID (NCBI) 100847075
Atlas_Id 69878
Location 6p12.1  [Link to chromosome band 6p12]
Location_base_pair Starts at 53276993 and ends at 53277071 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MIR5685   43543
Cards
Entrez_Gene (NCBI)MIR5685    microRNA 5685
Aliases
GeneCards (Weizmann)MIR5685
Ensembl hg19 (Hinxton)ENSG00000264056 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000264056 [Gene_View]  ENSG00000264056 [Sequence]  chr6:53276993-53277071 [Contig_View]  MIR5685 [Vega]
ICGC DataPortalENSG00000264056
TCGA cBioPortalMIR5685
AceView (NCBI)MIR5685
Genatlas (Paris)MIR5685
SOURCE (Princeton)MIR5685
Genetics Home Reference (NIH)MIR5685
miRBaseMIR5685
dbDEMCMIR5685
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5685  -     chr6:53276993-53277071 +  6p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5685  -     6p12.1   [Description]    (hg19-Feb_2009)
GoldenPathMIR5685 - 6p12.1 [CytoView hg19]  MIR5685 - 6p12.1 [CytoView hg38]
ImmunoBaseENSG00000264056
genome Data Viewer NCBIMIR5685 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5685
Alternative Splicing GalleryENSG00000264056
Gene ExpressionMIR5685 [ NCBI-GEO ]   MIR5685 [ EBI - ARRAY_EXPRESS ]   MIR5685 [ SEEK ]   MIR5685 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5685 [ Firebrowse - Broad ]
GenevisibleExpression of MIR5685 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100847075
GTEX Portal (Tissue expression)MIR5685
Human Protein AtlasENSG00000264056-MIR5685 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5685
Blocks (Seattle)MIR5685
Human Protein Atlas [tissue]ENSG00000264056-MIR5685 [tissue]
Protein Interaction databases
BioGRIDMIR5685
STRING (EMBL)MIR5685
ZODIACMIR5685
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5685
EVEXMIR5685
GoPubMedMIR5685
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:16:12 CET 2020

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