Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR5688 (microRNA 5688)

Identity

Alias_symbol (synonym)hsa-mir-5688
Other alias-
HGNC (Hugo) MIR5688
LocusID (NCBI) 100847077
Atlas_Id 69880
Location 3p12.1  [Link to chromosome band 3p12]
Location_base_pair Starts at 85434860 and ends at 85434942 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5688   43463
Cards
Entrez_Gene (NCBI)MIR5688  100847077  microRNA 5688
Aliases
GeneCards (Weizmann)MIR5688
Ensembl hg19 (Hinxton) [Gene_View]  chr3:85434860-85434942 [Contig_View]  MIR5688 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:85434860-85434942 [Contig_View]  MIR5688 [Vega]
TCGA cBioPortalMIR5688
AceView (NCBI)MIR5688
Genatlas (Paris)MIR5688
WikiGenes100847077
SOURCE (Princeton)MIR5688
Genetics Home Reference (NIH)MIR5688
miRBaseMIR5688
dbDEMCMIR5688
Genomic and cartography
GoldenPath hg19 (UCSC)MIR5688  -     chr3:85434860-85434942 +  3p12.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR5688  -     3p12.1   [Description]    (hg38-Dec_2013)
EnsemblMIR5688 - 3p12.1 [CytoView hg19]  MIR5688 - 3p12.1 [CytoView hg38]
Mapping of homologs : NCBIMIR5688 [Mapview hg19]  MIR5688 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_022517 NW_004929310
Consensus coding sequences : CCDS (NCBI)MIR5688
Gene ExpressionMIR5688 [ NCBI-GEO ]   MIR5688 [ EBI - ARRAY_EXPRESS ]   MIR5688 [ SEEK ]   MIR5688 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5688 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847077
GTEX Portal (Tissue expression)MIR5688
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5688
DMDM Disease mutations100847077
Blocks (Seattle)MIR5688
Protein Interaction databases
BioGRIDMIR5688
STRING (EMBL)MIR5688
ZODIACMIR5688
Ontologies - Pathways
Huge Navigator MIR5688 [HugePedia]
snp3D : Map Gene to Disease100847077
BioCentury BCIQMIR5688
ClinGenMIR5688
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847077
Clinical trialMIR5688
Miscellaneous
canSAR (ICR)MIR5688 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5688
EVEXMIR5688
GoPubMedMIR5688
iHOPMIR5688
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:31:43 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.