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MIR5689 (microRNA 5689)

Identity

Alias_symbol (synonym)hsa-mir-5689
Other alias-
HGNC (Hugo) MIR5689
LocusID (NCBI) 100846998
Atlas_Id 69881
Location 6p24.3  [Link to chromosome band 6p24]
Location_base_pair Starts at 10439717 and ends at 10439794 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5689   43479
Cards
Entrez_Gene (NCBI)MIR5689  100846998  microRNA 5689
Aliases
GeneCards (Weizmann)MIR5689
Ensembl hg19 (Hinxton)ENSG00000263705 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000263705 [Gene_View]  ENSG00000263705 [Sequence]  chr6:10439717-10439794 [Contig_View]  MIR5689 [Vega]
ICGC DataPortalENSG00000263705
TCGA cBioPortalMIR5689
AceView (NCBI)MIR5689
Genatlas (Paris)MIR5689
WikiGenes100846998
SOURCE (Princeton)MIR5689
Genetics Home Reference (NIH)MIR5689
miRBaseMIR5689
dbDEMCMIR5689
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5689  -     chr6:10439717-10439794 +  6p24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5689  -     6p24.3   [Description]    (hg19-Feb_2009)
EnsemblMIR5689 - 6p24.3 [CytoView hg19]  MIR5689 - 6p24.3 [CytoView hg38]
Mapping of homologs : NCBIMIR5689 [Mapview hg19]  MIR5689 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5689
Alternative Splicing GalleryENSG00000263705
Gene ExpressionMIR5689 [ NCBI-GEO ]   MIR5689 [ EBI - ARRAY_EXPRESS ]   MIR5689 [ SEEK ]   MIR5689 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5689 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100846998
GTEX Portal (Tissue expression)MIR5689
Human Protein AtlasENSG00000263705-MIR5689 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5689
DMDM Disease mutations100846998
Blocks (Seattle)MIR5689
Human Protein Atlas [tissue]ENSG00000263705-MIR5689 [tissue]
Protein Interaction databases
FunCoupENSG00000263705
BioGRIDMIR5689
STRING (EMBL)MIR5689
ZODIACMIR5689
Ontologies - Pathways
Huge Navigator MIR5689 [HugePedia]
snp3D : Map Gene to Disease100846998
BioCentury BCIQMIR5689
ClinGenMIR5689
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100846998
Clinical trialMIR5689
Miscellaneous
canSAR (ICR)MIR5689 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5689
EVEXMIR5689
GoPubMedMIR5689
iHOPMIR5689
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:16:22 CEST 2018

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