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MIR5689HG (MIR5689 host gene)

Identity

Other alias-
HGNC (Hugo) MIR5689HG
LocusID (NCBI) 106660610
Atlas_Id 77935
Location 6p24.3  [Link to chromosome band 6p24]
Location_base_pair Starts at 10434329 and ends at 10456779 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5689HG   52007
Cards
Entrez_Gene (NCBI)MIR5689HG  106660610  MIR5689 host gene
Aliases
GeneCards (Weizmann)MIR5689HG
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:10434329-10456779 [Contig_View]  MIR5689HG [Vega]
TCGA cBioPortalMIR5689HG
AceView (NCBI)MIR5689HG
Genatlas (Paris)MIR5689HG
WikiGenes106660610
SOURCE (Princeton)MIR5689HG
Genetics Home Reference (NIH)MIR5689HG
miRBaseMIR5689HG
dbDEMCMIR5689HG
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5689HG  -     chr6:10434329-10456779 +  6p24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5689HG  -     6p24.3   [Description]    (hg19-Feb_2009)
EnsemblMIR5689HG - 6p24.3 [CytoView hg19]  MIR5689HG - 6p24.3 [CytoView hg38]
Mapping of homologs : NCBIMIR5689HG [Mapview hg19]  MIR5689HG [Mapview hg38]
Gene and transcription
Genbank (Entrez)AV760024 BG576820
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5689HG
Cluster EST : UnigeneHs.575376 [ NCBI ]
CGAP (NCI)Hs.575376
Gene ExpressionMIR5689HG [ NCBI-GEO ]   MIR5689HG [ EBI - ARRAY_EXPRESS ]   MIR5689HG [ SEEK ]   MIR5689HG [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5689HG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)106660610
GTEX Portal (Tissue expression)MIR5689HG
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5689HG
DMDM Disease mutations106660610
Blocks (Seattle)MIR5689HG
Protein Interaction databases
BioGRIDMIR5689HG
STRING (EMBL)MIR5689HG
ZODIACMIR5689HG
Ontologies - Pathways
Huge Navigator MIR5689HG [HugePedia]
snp3D : Map Gene to Disease106660610
BioCentury BCIQMIR5689HG
ClinGenMIR5689HG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD106660610
Clinical trialMIR5689HG
Miscellaneous
canSAR (ICR)MIR5689HG (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5689HG
EVEXMIR5689HG
GoPubMedMIR5689HG
iHOPMIR5689HG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:16:22 CEST 2018

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