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MIR5689HG (MIR5689 host gene)

Identity

Alias (NCBI)-
HGNC (Hugo) MIR5689HG
LocusID (NCBI) 106660610
Atlas_Id 77935
Location 6p24.3  [Link to chromosome band 6p24]
Location_base_pair Starts at 10434329 and ends at 10456779 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5689HG   52007
Cards
Entrez_Gene (NCBI)MIR5689HG  106660610  MIR5689 host gene
Aliases
GeneCards (Weizmann)MIR5689HG
Ensembl hg19 (Hinxton)ENSG00000229401 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229401 [Gene_View]  ENSG00000229401 [Sequence]  chr6:10434329-10456779 [Contig_View]  MIR5689HG [Vega]
ICGC DataPortalENSG00000229401
TCGA cBioPortalMIR5689HG
AceView (NCBI)MIR5689HG
Genatlas (Paris)MIR5689HG
WikiGenes106660610
SOURCE (Princeton)MIR5689HG
Genetics Home Reference (NIH)MIR5689HG
miRBaseMIR5689HG
dbDEMCMIR5689HG
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5689HG  -     chr6:10434329-10456779 +  6p24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5689HG  -     6p24.3   [Description]    (hg19-Feb_2009)
GoldenPathMIR5689HG - 6p24.3 [CytoView hg19]  MIR5689HG - 6p24.3 [CytoView hg38]
ImmunoBaseENSG00000229401
genome Data Viewer NCBIMIR5689HG [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AV760024 BG576820
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5689HG
Alternative Splicing GalleryENSG00000229401
Gene ExpressionMIR5689HG [ NCBI-GEO ]   MIR5689HG [ EBI - ARRAY_EXPRESS ]   MIR5689HG [ SEEK ]   MIR5689HG [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5689HG [ Firebrowse - Broad ]
GenevisibleExpression of MIR5689HG in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)106660610
GTEX Portal (Tissue expression)MIR5689HG
Human Protein AtlasENSG00000229401-MIR5689HG [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5689HG
DMDM Disease mutations106660610
Blocks (Seattle)MIR5689HG
Human Protein Atlas [tissue]ENSG00000229401-MIR5689HG [tissue]
Protein Interaction databases
FunCoupENSG00000229401
BioGRIDMIR5689HG
STRING (EMBL)MIR5689HG
ZODIACMIR5689HG
Ontologies - Pathways
Huge Navigator MIR5689HG [HugePedia]
snp3D : Map Gene to Disease106660610
BioCentury BCIQMIR5689HG
ClinGenMIR5689HG
Clinical trials, drugs, therapy
Protein Interactions : CTD106660610
Clinical trialMIR5689HG
Miscellaneous
canSAR (ICR)MIR5689HG (select the gene name)
HarmonizomeMIR5689HG
DataMed IndexMIR5689HG
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5689HG
EVEXMIR5689HG
GoPubMedMIR5689HG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Aug 22 19:26:49 CEST 2020

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