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MIR5690 (microRNA 5690)

Identity

Alias_symbol (synonym)hsa-mir-5690
Other alias-
HGNC (Hugo) MIR5690
LocusID (NCBI) 100847048
Atlas_Id 69883
Location 6p21.31  [Link to chromosome band 6p21]
Location_base_pair Starts at 35664717 and ends at 35664789 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5690   43490
Cards
Entrez_Gene (NCBI)MIR5690  100847048  microRNA 5690
Aliases
GeneCards (Weizmann)MIR5690
Ensembl hg19 (Hinxton)ENSG00000265527 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265527 [Gene_View]  ENSG00000265527 [Sequence]  chr6:35664717-35664789 [Contig_View]  MIR5690 [Vega]
ICGC DataPortalENSG00000265527
TCGA cBioPortalMIR5690
AceView (NCBI)MIR5690
Genatlas (Paris)MIR5690
WikiGenes100847048
SOURCE (Princeton)MIR5690
Genetics Home Reference (NIH)MIR5690
miRBaseMIR5690
dbDEMCMIR5690
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5690  -     chr6:35664717-35664789 -  6p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5690  -     6p21.31   [Description]    (hg19-Feb_2009)
EnsemblMIR5690 - 6p21.31 [CytoView hg19]  MIR5690 - 6p21.31 [CytoView hg38]
Mapping of homologs : NCBIMIR5690 [Mapview hg19]  MIR5690 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5690
Alternative Splicing GalleryENSG00000265527
Gene ExpressionMIR5690 [ NCBI-GEO ]   MIR5690 [ EBI - ARRAY_EXPRESS ]   MIR5690 [ SEEK ]   MIR5690 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5690 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847048
GTEX Portal (Tissue expression)MIR5690
Human Protein AtlasENSG00000265527-MIR5690 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5690
DMDM Disease mutations100847048
Blocks (Seattle)MIR5690
Human Protein Atlas [tissue]ENSG00000265527-MIR5690 [tissue]
Protein Interaction databases
FunCoupENSG00000265527
BioGRIDMIR5690
STRING (EMBL)MIR5690
ZODIACMIR5690
Ontologies - Pathways
Huge Navigator MIR5690 [HugePedia]
snp3D : Map Gene to Disease100847048
BioCentury BCIQMIR5690
ClinGenMIR5690
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847048
Clinical trialMIR5690
Miscellaneous
canSAR (ICR)MIR5690 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5690
EVEXMIR5690
GoPubMedMIR5690
iHOPMIR5690
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:16:23 CEST 2018

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