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MIR5697 (microRNA 5697)

Identity

Alias_symbol (synonym)hsa-mir-5697
Other alias-
HGNC (Hugo) MIR5697
LocusID (NCBI) 100847055
Atlas_Id 76708
Location 1p36.22  [Link to chromosome band 1p36]
Location_base_pair Starts at 9967381 and ends at 9967458 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5697   43509
Cards
Entrez_Gene (NCBI)MIR5697  100847055  microRNA 5697
Aliases
GeneCards (Weizmann)MIR5697
Ensembl hg19 (Hinxton)ENSG00000265521 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265521 [Gene_View]  chr1:9967381-9967458 [Contig_View]  MIR5697 [Vega]
ICGC DataPortalENSG00000265521
TCGA cBioPortalMIR5697
AceView (NCBI)MIR5697
Genatlas (Paris)MIR5697
WikiGenes100847055
SOURCE (Princeton)MIR5697
Genetics Home Reference (NIH)MIR5697
miRBaseMIR5697
dbDEMCMIR5697
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5697  -     chr1:9967381-9967458 +  1p36.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5697  -     1p36.22   [Description]    (hg19-Feb_2009)
EnsemblMIR5697 - 1p36.22 [CytoView hg19]  MIR5697 - 1p36.22 [CytoView hg38]
Mapping of homologs : NCBIMIR5697 [Mapview hg19]  MIR5697 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5697
Alternative Splicing GalleryENSG00000265521
Gene ExpressionMIR5697 [ NCBI-GEO ]   MIR5697 [ EBI - ARRAY_EXPRESS ]   MIR5697 [ SEEK ]   MIR5697 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5697 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847055
GTEX Portal (Tissue expression)MIR5697
Human Protein AtlasENSG00000265521-MIR5697 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5697
DMDM Disease mutations100847055
Blocks (Seattle)MIR5697
Human Protein Atlas [tissue]ENSG00000265521-MIR5697 [tissue]
Protein Interaction databases
FunCoupENSG00000265521
BioGRIDMIR5697
STRING (EMBL)MIR5697
ZODIACMIR5697
Ontologies - Pathways
Huge Navigator MIR5697 [HugePedia]
snp3D : Map Gene to Disease100847055
BioCentury BCIQMIR5697
ClinGenMIR5697
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847055
Clinical trialMIR5697
Miscellaneous
canSAR (ICR)MIR5697 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5697
EVEXMIR5697
GoPubMedMIR5697
iHOPMIR5697
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:01:42 CET 2017

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