Atlas of Genetics and Cytogenetics in Oncology and Haematology

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MIR5699 (microRNA 5699)

Identity

Alias_symbol (synonym)hsa-mir-5699
Other aliasmir-5699
HGNC (Hugo) MIR5699
LocusID (NCBI) 100847086
Atlas_Id 78519
Location 10p15.3  [Link to chromosome band 10p15]
Location_base_pair Starts at 641689 and ends at 641778 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MIR5699   43456
Cards
Entrez_Gene (NCBI)MIR5699  100847086  microRNA 5699
Aliasesmir-5699
GeneCards (Weizmann)MIR5699
Ensembl hg19 (Hinxton)ENSG00000263511 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000263511 [Gene_View]  ENSG00000263511 [Sequence]  chr10:641689-641778 [Contig_View]  MIR5699 [Vega]
ICGC DataPortalENSG00000263511
TCGA cBioPortalMIR5699
AceView (NCBI)MIR5699
Genatlas (Paris)MIR5699
WikiGenes100847086
SOURCE (Princeton)MIR5699
Genetics Home Reference (NIH)MIR5699
miRBaseMIR5699
dbDEMCMIR5699
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5699  -     chr10:641689-641778 -  10p15.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5699  -     10p15.3   [Description]    (hg19-Feb_2009)
EnsemblMIR5699 - 10p15.3 [CytoView hg19]  MIR5699 - 10p15.3 [CytoView hg38]
Mapping of homologs : NCBIMIR5699 [Mapview hg19]  MIR5699 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM611615
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5699
Alternative Splicing GalleryENSG00000263511
Gene ExpressionMIR5699 [ NCBI-GEO ]   MIR5699 [ EBI - ARRAY_EXPRESS ]   MIR5699 [ SEEK ]   MIR5699 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5699 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847086
GTEX Portal (Tissue expression)MIR5699
Human Protein AtlasENSG00000263511-MIR5699 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5699
DMDM Disease mutations100847086
Blocks (Seattle)MIR5699
Human Protein Atlas [tissue]ENSG00000263511-MIR5699 [tissue]
Protein Interaction databases
FunCoupENSG00000263511
BioGRIDMIR5699
STRING (EMBL)MIR5699
ZODIACMIR5699
Ontologies - Pathways
Huge Navigator MIR5699 [HugePedia]
snp3D : Map Gene to Disease100847086
BioCentury BCIQMIR5699
ClinGenMIR5699
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847086
Clinical trialMIR5699
Miscellaneous
canSAR (ICR)MIR5699 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5699
EVEXMIR5699
GoPubMedMIR5699
iHOPMIR5699
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:16:26 CEST 2018
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