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MIR570 (microRNA 570)

Identity

Alias_namesMIRN570
Alias_symbol (synonym)hsa-mir-570
Other alias
HGNC (Hugo) MIR570
LocusID (NCBI) 693155
Atlas_Id 53479
Location 3q29  [Link to chromosome band 3q29]
Location_base_pair Starts at 195699401 and ends at 195699497 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  Lung: Translocations in Squamous Cell Carcinoma


External links

<R>
Nomenclature
HGNC (Hugo)MIR570   32826
Cards
Entrez_Gene (NCBI)MIR570  693155  microRNA 570
AliasesMIRN570; hsa-mir-570
GeneCards (Weizmann)MIR570
Ensembl hg19 (Hinxton)ENSG00000207650 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207650 [Gene_View]  chr3:195699401-195699497 [Contig_View]  MIR570 [Vega]
ICGC DataPortalENSG00000207650
TCGA cBioPortalMIR570
AceView (NCBI)MIR570
Genatlas (Paris)MIR570
WikiGenes693155
SOURCE (Princeton)MIR570
Genetics Home Reference (NIH)MIR570
miRBaseMIR570
dbDEMCMIR570
Genomic and cartography
GoldenPath hg38 (UCSC)MIR570  -     chr3:195699401-195699497 +  3q29   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR570  -     3q29   [Description]    (hg19-Feb_2009)
EnsemblMIR570 - 3q29 [CytoView hg19]  MIR570 - 3q29 [CytoView hg38]
Mapping of homologs : NCBIMIR570 [Mapview hg19]  MIR570 [Mapview hg38]
OMIM614538   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_187532 NT_187649 NT_187678 NT_187688 NT_187689 NT_187690 NT_187691
Consensus coding sequences : CCDS (NCBI)MIR570
Alternative Splicing GalleryENSG00000207650
Gene ExpressionMIR570 [ NCBI-GEO ]   MIR570 [ EBI - ARRAY_EXPRESS ]   MIR570 [ SEEK ]   MIR570 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR570 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)693155
GTEX Portal (Tissue expression)MIR570
Human Protein AtlasENSG00000207650-MIR570 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR570
DMDM Disease mutations693155
Blocks (Seattle)MIR570
Human Protein Atlas [tissue]ENSG00000207650-MIR570 [tissue]
Protein Interaction databases
FunCoupENSG00000207650
BioGRIDMIR570
STRING (EMBL)MIR570
ZODIACMIR570
Ontologies - Pathways
Huge Navigator MIR570 [HugePedia]
snp3D : Map Gene to Disease693155
BioCentury BCIQMIR570
ClinGenMIR570
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD693155
Chemical/Pharm GKB GenePA164722867
Clinical trialMIR570
Miscellaneous
canSAR (ICR)MIR570 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR570
EVEXMIR570
GoPubMedMIR570
iHOPMIR570
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 13:00:25 CET 2017

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