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MIR5700 (microRNA 5700)

Identity

Alias_symbol (synonym)hsa-mir-5700
Other alias-
HGNC (Hugo) MIR5700
LocusID (NCBI) 100847031
Atlas_Id 69895
Location 12q22  [Link to chromosome band 12q22]
Location_base_pair Starts at 94561789 and ends at 94561859 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5700   43521
Cards
Entrez_Gene (NCBI)MIR5700  100847031  microRNA 5700
Aliases
GeneCards (Weizmann)MIR5700
Ensembl hg19 (Hinxton)ENSG00000266099 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000266099 [Gene_View]  chr12:94561789-94561859 [Contig_View]  MIR5700 [Vega]
ICGC DataPortalENSG00000266099
TCGA cBioPortalMIR5700
AceView (NCBI)MIR5700
Genatlas (Paris)MIR5700
WikiGenes100847031
SOURCE (Princeton)MIR5700
Genetics Home Reference (NIH)MIR5700
miRBaseMIR5700
dbDEMCMIR5700
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5700  -     chr12:94561789-94561859 +  12q22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5700  -     12q22   [Description]    (hg19-Feb_2009)
EnsemblMIR5700 - 12q22 [CytoView hg19]  MIR5700 - 12q22 [CytoView hg38]
Mapping of homologs : NCBIMIR5700 [Mapview hg19]  MIR5700 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5700
Alternative Splicing GalleryENSG00000266099
Gene ExpressionMIR5700 [ NCBI-GEO ]   MIR5700 [ EBI - ARRAY_EXPRESS ]   MIR5700 [ SEEK ]   MIR5700 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5700 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847031
GTEX Portal (Tissue expression)MIR5700
Human Protein AtlasENSG00000266099-MIR5700 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5700
DMDM Disease mutations100847031
Blocks (Seattle)MIR5700
Human Protein Atlas [tissue]ENSG00000266099-MIR5700 [tissue]
Protein Interaction databases
FunCoupENSG00000266099
BioGRIDMIR5700
STRING (EMBL)MIR5700
ZODIACMIR5700
Ontologies - Pathways
Huge Navigator MIR5700 [HugePedia]
snp3D : Map Gene to Disease100847031
BioCentury BCIQMIR5700
ClinGenMIR5700
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847031
Clinical trialMIR5700
Miscellaneous
canSAR (ICR)MIR5700 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5700
EVEXMIR5700
GoPubMedMIR5700
iHOPMIR5700
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:16:00 CET 2017

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