Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR5701-2 (microRNA 5701-2)

Identity

Alias (NCBI)-
HGNC (Hugo) MIR5701-2
HGNC Alias symbhsa-mir-5701-2
LocusID (NCBI) 100847005
Atlas_Id 77104
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 20940252 and ends at 20940333 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5701-2   43510
Cards
Entrez_Gene (NCBI)MIR5701-2  100847005  microRNA 5701-2
Aliases
GeneCards (Weizmann)MIR5701-2
Ensembl hg19 (Hinxton)ENSG00000277841 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000277841 [Gene_View]  ENSG00000277841 [Sequence]  chr15:20940252-20940333 [Contig_View]  MIR5701-2 [Vega]
ICGC DataPortalENSG00000277841
TCGA cBioPortalMIR5701-2
AceView (NCBI)MIR5701-2
Genatlas (Paris)MIR5701-2
WikiGenes100847005
SOURCE (Princeton)MIR5701-2
Genetics Home Reference (NIH)MIR5701-2
miRBaseMIR5701-2
dbDEMCMIR5701-2
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5701-2  -     chr15:20940252-20940333 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5701-2  -     15q11.2   [Description]    (hg19-Feb_2009)
GoldenPathMIR5701-2 - 15q11.2 [CytoView hg19]  MIR5701-2 - 15q11.2 [CytoView hg38]
ImmunoBaseENSG00000277841
genome Data Viewer NCBIMIR5701-2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000015 NT_187602 NW_021160017
Consensus coding sequences : CCDS (NCBI)MIR5701-2
Alternative Splicing GalleryENSG00000277841
Gene ExpressionMIR5701-2 [ NCBI-GEO ]   MIR5701-2 [ EBI - ARRAY_EXPRESS ]   MIR5701-2 [ SEEK ]   MIR5701-2 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5701-2 [ Firebrowse - Broad ]
GenevisibleExpression of MIR5701-2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100847005
GTEX Portal (Tissue expression)MIR5701-2
Human Protein AtlasENSG00000277841-MIR5701-2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5701-2
DMDM Disease mutations100847005
Blocks (Seattle)MIR5701-2
Human Protein Atlas [tissue]ENSG00000277841-MIR5701-2 [tissue]
Protein Interaction databases
FunCoupENSG00000277841
BioGRIDMIR5701-2
STRING (EMBL)MIR5701-2
ZODIACMIR5701-2
Ontologies - Pathways
Huge Navigator MIR5701-2 [HugePedia]
snp3D : Map Gene to Disease100847005
BioCentury BCIQMIR5701-2
ClinGenMIR5701-2
Clinical trials, drugs, therapy
Protein Interactions : CTD100847005
Clinical trialMIR5701-2
Miscellaneous
canSAR (ICR)MIR5701-2 (select the gene name)
HarmonizomeMIR5701-2
DataMed IndexMIR5701-2
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5701-2
EVEXMIR5701-2
GoPubMedMIR5701-2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jul 16 16:16:48 CEST 2020

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