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MIR5739 (microRNA 5739)

Identity

Alias (NCBI)hsa-mir-5739
HGNC (Hugo) MIR5739
HGNC Alias symbhsa-mir-5739
LocusID (NCBI) 102466081
Atlas_Id 69903
Location 22q12.1  [Link to chromosome band 22q12]
Location_base_pair Starts at 28459869 and ends at 28459948 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MIR5739   49977
Cards
Entrez_Gene (NCBI)MIR5739    microRNA 5739
Aliaseshsa-mir-5739
GeneCards (Weizmann)MIR5739
Ensembl hg19 (Hinxton)ENSG00000276162 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000276162 [Gene_View]  ENSG00000276162 [Sequence]  chr22:28459869-28459948 [Contig_View]  MIR5739 [Vega]
ICGC DataPortalENSG00000276162
TCGA cBioPortalMIR5739
AceView (NCBI)MIR5739
Genatlas (Paris)MIR5739
SOURCE (Princeton)MIR5739
Genetics Home Reference (NIH)MIR5739
miRBaseMIR5739
dbDEMCMIR5739
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5739  -     chr22:28459869-28459948 +  22q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5739  -     22q12.1   [Description]    (hg19-Feb_2009)
GoldenPathMIR5739 - 22q12.1 [CytoView hg19]  MIR5739 - 22q12.1 [CytoView hg38]
ImmunoBaseENSG00000276162
genome Data Viewer NCBIMIR5739 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5739
Alternative Splicing GalleryENSG00000276162
Gene ExpressionMIR5739 [ NCBI-GEO ]   MIR5739 [ EBI - ARRAY_EXPRESS ]   MIR5739 [ SEEK ]   MIR5739 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5739 [ Firebrowse - Broad ]
GenevisibleExpression of MIR5739 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102466081
GTEX Portal (Tissue expression)MIR5739
Human Protein AtlasENSG00000276162-MIR5739 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5739
Blocks (Seattle)MIR5739
Human Protein Atlas [tissue]ENSG00000276162-MIR5739 [tissue]
Protein Interaction databases
BioGRIDMIR5739
STRING (EMBL)MIR5739
ZODIACMIR5739
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5739
EVEXMIR5739
GoPubMedMIR5739
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:16:18 CET 2020

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