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MIR579 (microRNA 579)

Identity

Other aliasMIRN579
hsa-mir-579
HGNC (Hugo) MIR579
LocusID (NCBI) 693164
Atlas_Id 57295
Location 5p13.3  [Link to chromosome band 5p13]
Location_base_pair Starts at 32394378 and ends at 32394475 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MIR579   32835
Cards
Entrez_Gene (NCBI)MIR579  693164  microRNA 579
AliasesMIRN579; hsa-mir-579
GeneCards (Weizmann)MIR579
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View] [Sequence]  chr5:32394378-32394475 [Contig_View]  MIR579 [Vega]
TCGA cBioPortalMIR579
AceView (NCBI)MIR579
Genatlas (Paris)MIR579
WikiGenes693164
SOURCE (Princeton)MIR579
Genetics Home Reference (NIH)MIR579
miRBaseMIR579
dbDEMCMIR579
Genomic and cartography
GoldenPath hg38 (UCSC)MIR579  -     chr5:32394378-32394475 -  5p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR579  -     5p13.3   [Description]    (hg19-Feb_2009)
EnsemblMIR579 - 5p13.3 [CytoView hg19]  MIR579 - 5p13.3 [CytoView hg38]
Mapping of homologs : NCBIMIR579 [Mapview hg19]  MIR579 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR579
Gene ExpressionMIR579 [ NCBI-GEO ]   MIR579 [ EBI - ARRAY_EXPRESS ]   MIR579 [ SEEK ]   MIR579 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR579 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)693164
GTEX Portal (Tissue expression)MIR579
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR579
DMDM Disease mutations693164
Blocks (Seattle)MIR579
Protein Interaction databases
BioGRIDMIR579
STRING (EMBL)MIR579
ZODIACMIR579
Ontologies - Pathways
Huge Navigator MIR579 [HugePedia]
snp3D : Map Gene to Disease693164
BioCentury BCIQMIR579
ClinGenMIR579
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD693164
Chemical/Pharm GKB GenePA164722876
Clinical trialMIR579
Miscellaneous
canSAR (ICR)MIR579 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR579
EVEXMIR579
GoPubMedMIR579
iHOPMIR579
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jun 21 17:02:37 CEST 2018
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