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MIR580 (microRNA 580)

Identity

Alias_namesMIRN580
Alias_symbol (synonym)hsa-mir-580
Other alias
HGNC (Hugo) MIR580
LocusID (NCBI) 693165
Atlas_Id 69907
Location 5p13.2  [Link to chromosome band 5p13]
Location_base_pair Starts at 36147892 and ends at 36147988 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR580   32836
Cards
Entrez_Gene (NCBI)MIR580  693165  microRNA 580
AliasesMIRN580; hsa-mir-580
GeneCards (Weizmann)MIR580
Ensembl hg19 (Hinxton)ENSG00000207756 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207756 [Gene_View]  chr5:36147892-36147988 [Contig_View]  MIR580 [Vega]
ICGC DataPortalENSG00000207756
TCGA cBioPortalMIR580
AceView (NCBI)MIR580
Genatlas (Paris)MIR580
WikiGenes693165
SOURCE (Princeton)MIR580
Genetics Home Reference (NIH)MIR580
miRBaseMIR580
dbDEMCMIR580
Genomic and cartography
GoldenPath hg38 (UCSC)MIR580  -     chr5:36147892-36147988 -  5p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR580  -     5p13.2   [Description]    (hg19-Feb_2009)
EnsemblMIR580 - 5p13.2 [CytoView hg19]  MIR580 - 5p13.2 [CytoView hg38]
Mapping of homologs : NCBIMIR580 [Mapview hg19]  MIR580 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR580
Alternative Splicing GalleryENSG00000207756
Gene ExpressionMIR580 [ NCBI-GEO ]   MIR580 [ EBI - ARRAY_EXPRESS ]   MIR580 [ SEEK ]   MIR580 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR580 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)693165
GTEX Portal (Tissue expression)MIR580
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR580
DMDM Disease mutations693165
Blocks (Seattle)MIR580
Human Protein AtlasENSG00000207756
Protein Interaction databases
FunCoupENSG00000207756
BioGRIDMIR580
STRING (EMBL)MIR580
ZODIACMIR580
Ontologies - Pathways
Huge Navigator MIR580 [HugePedia]
snp3D : Map Gene to Disease693165
BioCentury BCIQMIR580
ClinGenMIR580
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD693165
Chemical/Pharm GKB GenePA164722877
Clinical trialMIR580
Miscellaneous
canSAR (ICR)MIR580 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR580
EVEXMIR580
GoPubMedMIR580
iHOPMIR580
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:29:39 CEST 2017

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