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MIR588 (microRNA 588)

Identity

Other aliasMIRN588
hsa-mir-588
HGNC (Hugo) MIR588
LocusID (NCBI) 693173
Atlas_Id 56725
Location 6q22.32  [Link to chromosome band 6q22]
Location_base_pair Starts at 126484631 and ends at 126484713 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR588   32844
Cards
Entrez_Gene (NCBI)MIR588  693173  microRNA 588
AliasesMIRN588; hsa-mir-588
GeneCards (Weizmann)MIR588
Ensembl hg19 (Hinxton)ENSG00000207632 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207632 [Gene_View]  ENSG00000207632 [Sequence]  chr6:126484631-126484713 [Contig_View]  MIR588 [Vega]
ICGC DataPortalENSG00000207632
TCGA cBioPortalMIR588
AceView (NCBI)MIR588
Genatlas (Paris)MIR588
WikiGenes693173
SOURCE (Princeton)MIR588
Genetics Home Reference (NIH)MIR588
miRBaseMIR588
dbDEMCMIR588
Genomic and cartography
GoldenPath hg38 (UCSC)MIR588  -     chr6:126484631-126484713 +  6q22.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR588  -     6q22.32   [Description]    (hg19-Feb_2009)
EnsemblMIR588 - 6q22.32 [CytoView hg19]  MIR588 - 6q22.32 [CytoView hg38]
Mapping of homologs : NCBIMIR588 [Mapview hg19]  MIR588 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR588
Alternative Splicing GalleryENSG00000207632
Gene ExpressionMIR588 [ NCBI-GEO ]   MIR588 [ EBI - ARRAY_EXPRESS ]   MIR588 [ SEEK ]   MIR588 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR588 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)693173
GTEX Portal (Tissue expression)MIR588
Human Protein AtlasENSG00000207632-MIR588 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR588
DMDM Disease mutations693173
Blocks (Seattle)MIR588
Human Protein Atlas [tissue]ENSG00000207632-MIR588 [tissue]
Protein Interaction databases
FunCoupENSG00000207632
BioGRIDMIR588
STRING (EMBL)MIR588
ZODIACMIR588
Ontologies - Pathways
Huge Navigator MIR588 [HugePedia]
snp3D : Map Gene to Disease693173
BioCentury BCIQMIR588
ClinGenMIR588
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD693173
Chemical/Pharm GKB GenePA164722885
Clinical trialMIR588
Miscellaneous
canSAR (ICR)MIR588 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR588
EVEXMIR588
GoPubMedMIR588
iHOPMIR588
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 11:22:30 CET 2018

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