Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR596 (microRNA 596)

Identity

Alias_namesMIRN596
Alias_symbol (synonym)hsa-mir-596
Other alias
HGNC (Hugo) MIR596
LocusID (NCBI) 693181
Atlas_Id 53282
Location 8p23.3  [Link to chromosome band 8p23]
Location_base_pair Starts at 1817231 and ends at 1817307 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR596   32852
Cards
Entrez_Gene (NCBI)MIR596  693181  microRNA 596
AliasesMIRN596; hsa-mir-596
GeneCards (Weizmann)MIR596
Ensembl hg19 (Hinxton)ENSG00000207826 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207826 [Gene_View]  chr8:1817231-1817307 [Contig_View]  MIR596 [Vega]
ICGC DataPortalENSG00000207826
TCGA cBioPortalMIR596
AceView (NCBI)MIR596
Genatlas (Paris)MIR596
WikiGenes693181
SOURCE (Princeton)MIR596
Genetics Home Reference (NIH)MIR596
miRBaseMIR596
dbDEMCMIR596
Genomic and cartography
GoldenPath hg38 (UCSC)MIR596  -     chr8:1817231-1817307 +  8p23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR596  -     8p23.3   [Description]    (hg19-Feb_2009)
EnsemblMIR596 - 8p23.3 [CytoView hg19]  MIR596 - 8p23.3 [CytoView hg38]
Mapping of homologs : NCBIMIR596 [Mapview hg19]  MIR596 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_187576
Consensus coding sequences : CCDS (NCBI)MIR596
Alternative Splicing GalleryENSG00000207826
Gene ExpressionMIR596 [ NCBI-GEO ]   MIR596 [ EBI - ARRAY_EXPRESS ]   MIR596 [ SEEK ]   MIR596 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR596 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)693181
GTEX Portal (Tissue expression)MIR596
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR596
DMDM Disease mutations693181
Blocks (Seattle)MIR596
Human Protein AtlasENSG00000207826
Protein Interaction databases
FunCoupENSG00000207826
BioGRIDMIR596
STRING (EMBL)MIR596
ZODIACMIR596
Ontologies - Pathways
Huge Navigator MIR596 [HugePedia]
snp3D : Map Gene to Disease693181
BioCentury BCIQMIR596
ClinGenMIR596
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD693181
Chemical/Pharm GKB GenePA164722892
Clinical trialMIR596
Miscellaneous
canSAR (ICR)MIR596 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR596
EVEXMIR596
GoPubMedMIR596
iHOPMIR596
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 12:26:26 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.