Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR600HG (MIR600 host gene)

Identity

Alias_namesC9orf45
NCRNA00287
chromosome 9 open reading frame 45
non-protein coding RNA 287
MIR600 host gene (non-protein coding)
Alias_symbol (synonym)GL012
FLJ22161
Other alias
HGNC (Hugo) MIR600HG
LocusID (NCBI) 81571
Atlas_Id 69919
Location 9q33.3  [Link to chromosome band 9q33]
Location_base_pair Starts at 123109498 and ends at 123111165 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MIR600HG (9q33.3) / STRBP (9q33.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR600HG   23642
Cards
Entrez_Gene (NCBI)MIR600HG  81571  MIR600 host gene
AliasesC9orf45; GL012; NCRNA00287
GeneCards (Weizmann)MIR600HG
Ensembl hg19 (Hinxton)ENSG00000236901 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236901 [Gene_View]  chr9:123109498-123111165 [Contig_View]  MIR600HG [Vega]
ICGC DataPortalENSG00000236901
TCGA cBioPortalMIR600HG
AceView (NCBI)MIR600HG
Genatlas (Paris)MIR600HG
WikiGenes81571
SOURCE (Princeton)MIR600HG
Genetics Home Reference (NIH)MIR600HG
miRBaseMIR600HG
dbDEMCMIR600HG
Genomic and cartography
GoldenPath hg38 (UCSC)MIR600HG  -     chr9:123109498-123111165 -  9q33.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR600HG  -     9q33.3   [Description]    (hg19-Feb_2009)
EnsemblMIR600HG - 9q33.3 [CytoView hg19]  MIR600HG - 9q33.3 [CytoView hg38]
Mapping of homologs : NCBIMIR600HG [Mapview hg19]  MIR600HG [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF251293 AI699420 AJ420426 AK025814 AK123844
RefSeq transcript (Entrez)NM_030814
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR600HG
Cluster EST : UnigeneHs.733860 [ NCBI ]
CGAP (NCI)Hs.733860
Alternative Splicing GalleryENSG00000236901
Gene ExpressionMIR600HG [ NCBI-GEO ]   MIR600HG [ EBI - ARRAY_EXPRESS ]   MIR600HG [ SEEK ]   MIR600HG [ MEM ]
Gene Expression Viewer (FireBrowse)MIR600HG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)81571
GTEX Portal (Tissue expression)MIR600HG
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR600HG
DMDM Disease mutations81571
Blocks (Seattle)MIR600HG
Human Protein AtlasENSG00000236901
HPRD12960
IPIIPI00006616   
Protein Interaction databases
FunCoupENSG00000236901
BioGRIDMIR600HG
STRING (EMBL)MIR600HG
ZODIACMIR600HG
Ontologies - Pathways
Huge Navigator MIR600HG [HugePedia]
snp3D : Map Gene to Disease81571
BioCentury BCIQMIR600HG
ClinGenMIR600HG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD81571
Chemical/Pharm GKB GenePA134911672
Clinical trialMIR600HG
Miscellaneous
canSAR (ICR)MIR600HG (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR600HG
EVEXMIR600HG
GoPubMedMIR600HG
iHOPMIR600HG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:29:40 CEST 2017

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