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MIR6078 (microRNA 6078)

Identity

Alias_symbol (synonym)hsa-mir-6078
Other alias
HGNC (Hugo) MIR6078
LocusID (NCBI) 102464829
Atlas_Id 69931
Location 10p15.1  [Link to chromosome band 10p15]
Location_base_pair Starts at 3991160 and ends at 3991259 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR6078   50136
Cards
Entrez_Gene (NCBI)MIR6078  102464829  microRNA 6078
Aliaseshsa-mir-6078
GeneCards (Weizmann)MIR6078
Ensembl hg19 (Hinxton)ENSG00000274809 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000274809 [Gene_View]  chr10:3991160-3991259 [Contig_View]  MIR6078 [Vega]
ICGC DataPortalENSG00000274809
TCGA cBioPortalMIR6078
AceView (NCBI)MIR6078
Genatlas (Paris)MIR6078
WikiGenes102464829
SOURCE (Princeton)MIR6078
Genetics Home Reference (NIH)MIR6078
miRBaseMIR6078
dbDEMCMIR6078
Genomic and cartography
GoldenPath hg38 (UCSC)MIR6078  -     chr10:3991160-3991259 +  10p15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR6078  -     10p15.1   [Description]    (hg19-Feb_2009)
EnsemblMIR6078 - 10p15.1 [CytoView hg19]  MIR6078 - 10p15.1 [CytoView hg38]
Mapping of homologs : NCBIMIR6078 [Mapview hg19]  MIR6078 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR6078
Alternative Splicing GalleryENSG00000274809
Gene ExpressionMIR6078 [ NCBI-GEO ]   MIR6078 [ EBI - ARRAY_EXPRESS ]   MIR6078 [ SEEK ]   MIR6078 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR6078 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102464829
GTEX Portal (Tissue expression)MIR6078
Human Protein AtlasENSG00000274809-MIR6078 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR6078
DMDM Disease mutations102464829
Blocks (Seattle)MIR6078
Human Protein Atlas [tissue]ENSG00000274809-MIR6078 [tissue]
Protein Interaction databases
FunCoupENSG00000274809
BioGRIDMIR6078
STRING (EMBL)MIR6078
ZODIACMIR6078
Ontologies - Pathways
Huge Navigator MIR6078 [HugePedia]
snp3D : Map Gene to Disease102464829
BioCentury BCIQMIR6078
ClinGenMIR6078
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102464829
Clinical trialMIR6078
Miscellaneous
canSAR (ICR)MIR6078 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR6078
EVEXMIR6078
GoPubMedMIR6078
iHOPMIR6078
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:22:10 CET 2017

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