Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR620 (microRNA 620)

Identity

Alias_namesMIRN620
Alias_symbol (synonym)hsa-mir-620
Other alias
HGNC (Hugo) MIR620
LocusID (NCBI) 693205
Atlas_Id 55011
Location 12q24.21  [Link to chromosome band 12q24]
Location_base_pair Starts at 116148560 and ends at 116148654 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR620   32876
Cards
Entrez_Gene (NCBI)MIR620  693205  microRNA 620
AliasesMIRN620; hsa-mir-620
GeneCards (Weizmann)MIR620
Ensembl hg19 (Hinxton)ENSG00000207967 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207967 [Gene_View]  ENSG00000207967 [Sequence]  chr12:116148560-116148654 [Contig_View]  MIR620 [Vega]
ICGC DataPortalENSG00000207967
TCGA cBioPortalMIR620
AceView (NCBI)MIR620
Genatlas (Paris)MIR620
WikiGenes693205
SOURCE (Princeton)MIR620
Genetics Home Reference (NIH)MIR620
miRBaseMIR620
dbDEMCMIR620
Genomic and cartography
GoldenPath hg38 (UCSC)MIR620  -     chr12:116148560-116148654 -  12q24.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR620  -     12q24.21   [Description]    (hg19-Feb_2009)
EnsemblMIR620 - 12q24.21 [CytoView hg19]  MIR620 - 12q24.21 [CytoView hg38]
Mapping of homologs : NCBIMIR620 [Mapview hg19]  MIR620 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR620
Alternative Splicing GalleryENSG00000207967
Gene ExpressionMIR620 [ NCBI-GEO ]   MIR620 [ EBI - ARRAY_EXPRESS ]   MIR620 [ SEEK ]   MIR620 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR620 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)693205
GTEX Portal (Tissue expression)MIR620
Human Protein AtlasENSG00000207967-MIR620 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR620
DMDM Disease mutations693205
Blocks (Seattle)MIR620
Human Protein Atlas [tissue]ENSG00000207967-MIR620 [tissue]
Protein Interaction databases
FunCoupENSG00000207967
BioGRIDMIR620
STRING (EMBL)MIR620
ZODIACMIR620
Ontologies - Pathways
Huge Navigator MIR620 [HugePedia]
snp3D : Map Gene to Disease693205
BioCentury BCIQMIR620
ClinGenMIR620
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD693205
Chemical/Pharm GKB GenePA164722916
Clinical trialMIR620
Miscellaneous
canSAR (ICR)MIR620 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR620
EVEXMIR620
GoPubMedMIR620
iHOPMIR620
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 11:22:38 CET 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.