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MIR646HG (MIR646 host gene)

Identity

Alias_namesMIR646 host gene (non-protein coding)
Other alias-
HGNC (Hugo) MIR646HG
LocusID (NCBI) 284757
Atlas_Id 69977
Location 20q13.33  [Link to chromosome band 20q13]
Location_base_pair Starts at 58713548 and ends at 58897314 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR646HG   27659
Cards
Entrez_Gene (NCBI)MIR646HG  284757  MIR646 host gene
Aliases
GeneCards (Weizmann)MIR646HG
Ensembl hg19 (Hinxton)ENSG00000228340 [Gene_View]  chr20:58713548-58897314 [Contig_View]  MIR646HG [Vega]
Ensembl hg38 (Hinxton)ENSG00000228340 [Gene_View]  chr20:58713548-58897314 [Contig_View]  MIR646HG [Vega]
ICGC DataPortalENSG00000228340
TCGA cBioPortalMIR646HG
AceView (NCBI)MIR646HG
Genatlas (Paris)MIR646HG
WikiGenes284757
SOURCE (Princeton)MIR646HG
Genetics Home Reference (NIH)MIR646HG
miRBaseMIR646HG
dbDEMCMIR646HG
Genomic and cartography
GoldenPath hg19 (UCSC)MIR646HG  -     chr20:58713548-58897314 +  20q13.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR646HG  -     20q13.33   [Description]    (hg38-Dec_2013)
EnsemblMIR646HG - 20q13.33 [CytoView hg19]  MIR646HG - 20q13.33 [CytoView hg38]
Mapping of homologs : NCBIMIR646HG [Mapview hg19]  MIR646HG [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK092805 AK128288 AK309218 HG511501 HG511502
RefSeq transcript (Entrez)NM_001004305
RefSeq genomic (Entrez)NC_000020 NC_018931 NT_011362 NW_004929418
Consensus coding sequences : CCDS (NCBI)MIR646HG
Cluster EST : UnigeneHs.737441 [ NCBI ]
CGAP (NCI)Hs.737441
Alternative Splicing GalleryENSG00000228340
Gene ExpressionMIR646HG [ NCBI-GEO ]   MIR646HG [ EBI - ARRAY_EXPRESS ]   MIR646HG [ SEEK ]   MIR646HG [ MEM ]
Gene Expression Viewer (FireBrowse)MIR646HG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)284757
GTEX Portal (Tissue expression)MIR646HG
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR646HG
DMDM Disease mutations284757
Blocks (Seattle)MIR646HG
Human Protein AtlasENSG00000228340
HPRD17342
Protein Interaction databases
FunCoupENSG00000228340
BioGRIDMIR646HG
STRING (EMBL)MIR646HG
ZODIACMIR646HG
Ontologies - Pathways
Huge Navigator MIR646HG [HugePedia]
snp3D : Map Gene to Disease284757
BioCentury BCIQMIR646HG
ClinGenMIR646HG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284757
Clinical trialMIR646HG
Miscellaneous
canSAR (ICR)MIR646HG (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR646HG
EVEXMIR646HG
GoPubMedMIR646HG
iHOPMIR646HG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:32:03 CET 2017

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