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MIR647 (microRNA 647)

Identity

Other aliasMIRN647
hsa-mir-647
HGNC (Hugo) MIR647
LocusID (NCBI) 693232
Atlas_Id 56837
Location 20q13.33  [Link to chromosome band 20q13]
Location_base_pair Starts at 63942631 and ends at 63942726 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR647   32903
Cards
Entrez_Gene (NCBI)MIR647  693232  microRNA 647
AliasesMIRN647; hsa-mir-647
GeneCards (Weizmann)MIR647
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:63942631-63942726 [Contig_View]  MIR647 [Vega]
TCGA cBioPortalMIR647
AceView (NCBI)MIR647
Genatlas (Paris)MIR647
WikiGenes693232
SOURCE (Princeton)MIR647
Genetics Home Reference (NIH)MIR647
miRBaseMIR647
dbDEMCMIR647
Genomic and cartography
GoldenPath hg38 (UCSC)MIR647  -     chr20:63942631-63942726 -  20q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR647  -     20q13.33   [Description]    (hg19-Feb_2009)
EnsemblMIR647 - 20q13.33 [CytoView hg19]  MIR647 - 20q13.33 [CytoView hg38]
Mapping of homologs : NCBIMIR647 [Mapview hg19]  MIR647 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR647
Gene ExpressionMIR647 [ NCBI-GEO ]   MIR647 [ EBI - ARRAY_EXPRESS ]   MIR647 [ SEEK ]   MIR647 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR647 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)693232
GTEX Portal (Tissue expression)MIR647
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR647
DMDM Disease mutations693232
Blocks (Seattle)MIR647
Protein Interaction databases
BioGRIDMIR647
STRING (EMBL)MIR647
ZODIACMIR647
Ontologies - Pathways
Huge Navigator MIR647 [HugePedia]
snp3D : Map Gene to Disease693232
BioCentury BCIQMIR647
ClinGenMIR647
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD693232
Chemical/Pharm GKB GenePA164722943
Clinical trialMIR647
Miscellaneous
canSAR (ICR)MIR647 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR647
EVEXMIR647
GoPubMedMIR647
iHOPMIR647
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:24:09 CET 2017

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