Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR6729 (microRNA 6729)

Identity

Alias_symbol (synonym)hsa-mir-6729
Other alias
HGNC (Hugo) MIR6729
LocusID (NCBI) 102466982
Atlas_Id 70027
Location 1p36.22  [Link to chromosome band 1p36]
Location_base_pair Starts at 12029158 and ends at 12029222 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR6729   50103
Cards
Entrez_Gene (NCBI)MIR6729  102466982  microRNA 6729
Aliaseshsa-mir-6729
GeneCards (Weizmann)MIR6729
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:12029158-12029222 [Contig_View]  MIR6729 [Vega]
TCGA cBioPortalMIR6729
AceView (NCBI)MIR6729
Genatlas (Paris)MIR6729
WikiGenes102466982
SOURCE (Princeton)MIR6729
Genetics Home Reference (NIH)MIR6729
miRBaseMIR6729
dbDEMCMIR6729
Genomic and cartography
GoldenPath hg38 (UCSC)MIR6729  -     chr1:12029158-12029222 +  1p36.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR6729  -     1p36.22   [Description]    (hg19-Feb_2009)
EnsemblMIR6729 - 1p36.22 [CytoView hg19]  MIR6729 - 1p36.22 [CytoView hg38]
Mapping of homologs : NCBIMIR6729 [Mapview hg19]  MIR6729 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR6729
Gene ExpressionMIR6729 [ NCBI-GEO ]   MIR6729 [ EBI - ARRAY_EXPRESS ]   MIR6729 [ SEEK ]   MIR6729 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR6729 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102466982
GTEX Portal (Tissue expression)MIR6729
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR6729
DMDM Disease mutations102466982
Blocks (Seattle)MIR6729
Protein Interaction databases
BioGRIDMIR6729
STRING (EMBL)MIR6729
ZODIACMIR6729
Ontologies - Pathways
Huge Navigator MIR6729 [HugePedia]
snp3D : Map Gene to Disease102466982
BioCentury BCIQMIR6729
ClinGenMIR6729
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102466982
Clinical trialMIR6729
Miscellaneous
canSAR (ICR)MIR6729 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR6729
EVEXMIR6729
GoPubMedMIR6729
iHOPMIR6729
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:16:25 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.