Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR6780B (microRNA 6780b)

Identity

Alias (NCBI)hsa-mir-6780b
HGNC (Hugo) MIR6780B
HGNC Alias symbhsa-mir-6780b
LocusID (NCBI) 102466746
Atlas_Id 70081
Location 6p21.1  [Link to chromosome band 6p21]
Location_base_pair Starts at 43434542 and ends at 43434620 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR6780B   50237
Cards
Entrez_Gene (NCBI)MIR6780B  102466746  microRNA 6780b
Aliaseshsa-mir-6780b
GeneCards (Weizmann)MIR6780B
Ensembl hg19 (Hinxton)ENSG00000276770 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000276770 [Gene_View]  ENSG00000276770 [Sequence]  chr6:43434542-43434620 [Contig_View]  MIR6780B [Vega]
ICGC DataPortalENSG00000276770
TCGA cBioPortalMIR6780B
AceView (NCBI)MIR6780B
Genatlas (Paris)MIR6780B
WikiGenes102466746
SOURCE (Princeton)MIR6780B
Genetics Home Reference (NIH)MIR6780B
miRBaseMIR6780B
dbDEMCMIR6780B
Genomic and cartography
GoldenPath hg38 (UCSC)MIR6780B  -     chr6:43434542-43434620 +  6p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR6780B  -     6p21.1   [Description]    (hg19-Feb_2009)
GoldenPathMIR6780B - 6p21.1 [CytoView hg19]  MIR6780B - 6p21.1 [CytoView hg38]
ImmunoBaseENSG00000276770
genome Data Viewer NCBIMIR6780B [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR6780B
Alternative Splicing GalleryENSG00000276770
Gene ExpressionMIR6780B [ NCBI-GEO ]   MIR6780B [ EBI - ARRAY_EXPRESS ]   MIR6780B [ SEEK ]   MIR6780B [ MEM ]
Gene Expression Viewer (FireBrowse)MIR6780B [ Firebrowse - Broad ]
GenevisibleExpression of MIR6780B in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102466746
GTEX Portal (Tissue expression)MIR6780B
Human Protein AtlasENSG00000276770-MIR6780B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR6780B
DMDM Disease mutations102466746
Blocks (Seattle)MIR6780B
Human Protein Atlas [tissue]ENSG00000276770-MIR6780B [tissue]
Protein Interaction databases
FunCoupENSG00000276770
BioGRIDMIR6780B
STRING (EMBL)MIR6780B
ZODIACMIR6780B
Ontologies - Pathways
Huge Navigator MIR6780B [HugePedia]
snp3D : Map Gene to Disease102466746
BioCentury BCIQMIR6780B
ClinGenMIR6780B
Clinical trials, drugs, therapy
Protein Interactions : CTD102466746
Clinical trialMIR6780B
Miscellaneous
canSAR (ICR)MIR6780B (select the gene name)
HarmonizomeMIR6780B
DataMed IndexMIR6780B
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR6780B
EVEXMIR6780B
GoPubMedMIR6780B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Aug 22 19:27:14 CEST 2020

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