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MIR6817 (microRNA 6817)

Identity

Alias_symbol (synonym)hsa-mir-6817
Other alias
HGNC (Hugo) MIR6817
LocusID (NCBI) 102466198
Atlas_Id 70117
Location 22q11.23  [Link to chromosome band 22q11]
Location_base_pair Starts at 25455646 and ends at 25455711 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR6817   50112
Cards
Entrez_Gene (NCBI)MIR6817  102466198  microRNA 6817
Aliaseshsa-mir-6817
GeneCards (Weizmann)MIR6817
Ensembl hg19 (Hinxton)ENSG00000277872 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000277872 [Gene_View]  chr22:25455646-25455711 [Contig_View]  MIR6817 [Vega]
ICGC DataPortalENSG00000277872
TCGA cBioPortalMIR6817
AceView (NCBI)MIR6817
Genatlas (Paris)MIR6817
WikiGenes102466198
SOURCE (Princeton)MIR6817
Genetics Home Reference (NIH)MIR6817
miRBaseMIR6817
dbDEMCMIR6817
Genomic and cartography
GoldenPath hg38 (UCSC)MIR6817  -     chr22:25455646-25455711 +  22q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR6817  -     22q11.23   [Description]    (hg19-Feb_2009)
EnsemblMIR6817 - 22q11.23 [CytoView hg19]  MIR6817 - 22q11.23 [CytoView hg38]
Mapping of homologs : NCBIMIR6817 [Mapview hg19]  MIR6817 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR6817
Alternative Splicing GalleryENSG00000277872
Gene ExpressionMIR6817 [ NCBI-GEO ]   MIR6817 [ EBI - ARRAY_EXPRESS ]   MIR6817 [ SEEK ]   MIR6817 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR6817 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102466198
GTEX Portal (Tissue expression)MIR6817
Human Protein AtlasENSG00000277872-MIR6817 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR6817
DMDM Disease mutations102466198
Blocks (Seattle)MIR6817
Human Protein Atlas [tissue]ENSG00000277872-MIR6817 [tissue]
Protein Interaction databases
FunCoupENSG00000277872
BioGRIDMIR6817
STRING (EMBL)MIR6817
ZODIACMIR6817
Ontologies - Pathways
Huge Navigator MIR6817 [HugePedia]
snp3D : Map Gene to Disease102466198
BioCentury BCIQMIR6817
ClinGenMIR6817
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102466198
Clinical trialMIR6817
Miscellaneous
canSAR (ICR)MIR6817 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR6817
EVEXMIR6817
GoPubMedMIR6817
iHOPMIR6817
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:44:03 CET 2017

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