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MIR6871 (microRNA 6871)

Identity

Alias_symbol (synonym)hsa-mir-6871
Other alias
HGNC (Hugo) MIR6871
LocusID (NCBI) 102466912
Atlas_Id 70173
Location 20q12  [Link to chromosome band 20q12]
Location_base_pair Starts at 41169023 and ends at 41169078 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR6871   49964
Cards
Entrez_Gene (NCBI)MIR6871  102466912  microRNA 6871
Aliaseshsa-mir-6871
GeneCards (Weizmann)MIR6871
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:41169023-41169078 [Contig_View]  MIR6871 [Vega]
TCGA cBioPortalMIR6871
AceView (NCBI)MIR6871
Genatlas (Paris)MIR6871
WikiGenes102466912
SOURCE (Princeton)MIR6871
Genetics Home Reference (NIH)MIR6871
miRBaseMIR6871
dbDEMCMIR6871
Genomic and cartography
GoldenPath hg38 (UCSC)MIR6871  -     chr20:41169023-41169078 +  20q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR6871  -     20q12   [Description]    (hg19-Feb_2009)
EnsemblMIR6871 - 20q12 [CytoView hg19]  MIR6871 - 20q12 [CytoView hg38]
Mapping of homologs : NCBIMIR6871 [Mapview hg19]  MIR6871 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR6871
Gene ExpressionMIR6871 [ NCBI-GEO ]   MIR6871 [ EBI - ARRAY_EXPRESS ]   MIR6871 [ SEEK ]   MIR6871 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR6871 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102466912
GTEX Portal (Tissue expression)MIR6871
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR6871
DMDM Disease mutations102466912
Blocks (Seattle)MIR6871
Protein Interaction databases
BioGRIDMIR6871
STRING (EMBL)MIR6871
ZODIACMIR6871
Ontologies - Pathways
Huge Navigator MIR6871 [HugePedia]
snp3D : Map Gene to Disease102466912
BioCentury BCIQMIR6871
ClinGenMIR6871
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102466912
Clinical trialMIR6871
Miscellaneous
canSAR (ICR)MIR6871 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR6871
EVEXMIR6871
GoPubMedMIR6871
iHOPMIR6871
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:41:58 CET 2017

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