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MIR6872 (microRNA 6872)

Identity

Alias_symbol (synonym)hsa-mir-6872
Other alias
HGNC (Hugo) MIR6872
LocusID (NCBI) 102465526
Atlas_Id 70174
Location 3p21.31  [Link to chromosome band 3p21]
Location_base_pair Starts at 50273236 and ends at 50273297 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR6872   50037
Cards
Entrez_Gene (NCBI)MIR6872  102465526  microRNA 6872
Aliaseshsa-mir-6872
GeneCards (Weizmann)MIR6872
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:50273236-50273297 [Contig_View]  MIR6872 [Vega]
TCGA cBioPortalMIR6872
AceView (NCBI)MIR6872
Genatlas (Paris)MIR6872
WikiGenes102465526
SOURCE (Princeton)MIR6872
Genetics Home Reference (NIH)MIR6872
miRBaseMIR6872
dbDEMCMIR6872
Genomic and cartography
GoldenPath hg38 (UCSC)MIR6872  -     chr3:50273236-50273297 +  3p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR6872  -     3p21.31   [Description]    (hg19-Feb_2009)
EnsemblMIR6872 - 3p21.31 [CytoView hg19]  MIR6872 - 3p21.31 [CytoView hg38]
Mapping of homologs : NCBIMIR6872 [Mapview hg19]  MIR6872 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR6872
Gene ExpressionMIR6872 [ NCBI-GEO ]   MIR6872 [ EBI - ARRAY_EXPRESS ]   MIR6872 [ SEEK ]   MIR6872 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR6872 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102465526
GTEX Portal (Tissue expression)MIR6872
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR6872
DMDM Disease mutations102465526
Blocks (Seattle)MIR6872
Protein Interaction databases
BioGRIDMIR6872
STRING (EMBL)MIR6872
ZODIACMIR6872
Ontologies - Pathways
Huge Navigator MIR6872 [HugePedia]
snp3D : Map Gene to Disease102465526
BioCentury BCIQMIR6872
ClinGenMIR6872
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102465526
Clinical trialMIR6872
Miscellaneous
canSAR (ICR)MIR6872 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR6872
EVEXMIR6872
GoPubMedMIR6872
iHOPMIR6872
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:08:29 CET 2017

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