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MIR6880 (microRNA 6880)

Identity

Alias_symbol (synonym)hsa-mir-6880
Other alias
HGNC (Hugo) MIR6880
LocusID (NCBI) 102466204
Atlas_Id 70182
Location 12q24.31  [Link to chromosome band 12q24]
Location_base_pair Starts at 124337181 and ends at 124337242 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR6880   50187
Cards
Entrez_Gene (NCBI)MIR6880  102466204  microRNA 6880
Aliaseshsa-mir-6880
GeneCards (Weizmann)MIR6880
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr12:124337181-124337242 [Contig_View]  MIR6880 [Vega]
TCGA cBioPortalMIR6880
AceView (NCBI)MIR6880
Genatlas (Paris)MIR6880
WikiGenes102466204
SOURCE (Princeton)MIR6880
Genetics Home Reference (NIH)MIR6880
miRBaseMIR6880
dbDEMCMIR6880
Genomic and cartography
GoldenPath hg38 (UCSC)MIR6880  -     chr12:124337181-124337242 -  12q24.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR6880  -     12q24.31   [Description]    (hg19-Feb_2009)
EnsemblMIR6880 - 12q24.31 [CytoView hg19]  MIR6880 - 12q24.31 [CytoView hg38]
Mapping of homologs : NCBIMIR6880 [Mapview hg19]  MIR6880 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR6880
Gene ExpressionMIR6880 [ NCBI-GEO ]   MIR6880 [ EBI - ARRAY_EXPRESS ]   MIR6880 [ SEEK ]   MIR6880 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR6880 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102466204
GTEX Portal (Tissue expression)MIR6880
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR6880
DMDM Disease mutations102466204
Blocks (Seattle)MIR6880
Protein Interaction databases
BioGRIDMIR6880
STRING (EMBL)MIR6880
ZODIACMIR6880
Ontologies - Pathways
Huge Navigator MIR6880 [HugePedia]
snp3D : Map Gene to Disease102466204
BioCentury BCIQMIR6880
ClinGenMIR6880
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102466204
Clinical trialMIR6880
Miscellaneous
canSAR (ICR)MIR6880 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR6880
EVEXMIR6880
GoPubMedMIR6880
iHOPMIR6880
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:16:57 CET 2017

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