Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR6886 (microRNA 6886)

Identity

Alias_symbol (synonym)hsa-mir-6886
Other alias
HGNC (Hugo) MIR6886
LocusID (NCBI) 102465534
Atlas_Id 70188
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 11113474 and ends at 11113534 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR6886   50121
Cards
Entrez_Gene (NCBI)MIR6886  102465534  microRNA 6886
Aliaseshsa-mir-6886
GeneCards (Weizmann)MIR6886
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:11113474-11113534 [Contig_View]  MIR6886 [Vega]
TCGA cBioPortalMIR6886
AceView (NCBI)MIR6886
Genatlas (Paris)MIR6886
WikiGenes102465534
SOURCE (Princeton)MIR6886
Genetics Home Reference (NIH)MIR6886
miRBaseMIR6886
dbDEMCMIR6886
Genomic and cartography
GoldenPath hg38 (UCSC)MIR6886  -     chr19:11113474-11113534 +  19p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR6886  -     19p13.2   [Description]    (hg19-Feb_2009)
EnsemblMIR6886 - 19p13.2 [CytoView hg19]  MIR6886 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIMIR6886 [Mapview hg19]  MIR6886 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR6886
Gene ExpressionMIR6886 [ NCBI-GEO ]   MIR6886 [ EBI - ARRAY_EXPRESS ]   MIR6886 [ SEEK ]   MIR6886 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR6886 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102465534
GTEX Portal (Tissue expression)MIR6886
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR6886
DMDM Disease mutations102465534
Blocks (Seattle)MIR6886
Protein Interaction databases
BioGRIDMIR6886
STRING (EMBL)MIR6886
ZODIACMIR6886
Ontologies - Pathways
Huge Navigator MIR6886 [HugePedia]
snp3D : Map Gene to Disease102465534
BioCentury BCIQMIR6886
ClinGenMIR6886
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102465534
Clinical trialMIR6886
Miscellaneous
canSAR (ICR)MIR6886 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR6886
EVEXMIR6886
GoPubMedMIR6886
iHOPMIR6886
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:16:58 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.