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MIR6887 (microRNA 6887)

Identity

Alias (NCBI)hsa-mir-6887
HGNC (Hugo) MIR6887
HGNC Alias symbhsa-mir-6887
LocusID (NCBI) 102466205
Atlas_Id 70189
Location 19q13.12  [Link to chromosome band 19q13]
Location_base_pair Starts at 35122700 and ends at 35122764 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MIR6887   50065
Cards
Entrez_Gene (NCBI)MIR6887    microRNA 6887
Aliaseshsa-mir-6887
GeneCards (Weizmann)MIR6887
Ensembl hg19 (Hinxton)ENSG00000284065 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000284065 [Gene_View]  ENSG00000284065 [Sequence]  chr19:35122700-35122764 [Contig_View]  MIR6887 [Vega]
ICGC DataPortalENSG00000284065
TCGA cBioPortalMIR6887
AceView (NCBI)MIR6887
Genatlas (Paris)MIR6887
SOURCE (Princeton)MIR6887
Genetics Home Reference (NIH)MIR6887
miRBaseMIR6887
dbDEMCMIR6887
Genomic and cartography
GoldenPath hg38 (UCSC)MIR6887  -     chr19:35122700-35122764 +  19q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR6887  -     19q13.12   [Description]    (hg19-Feb_2009)
GoldenPathMIR6887 - 19q13.12 [CytoView hg19]  MIR6887 - 19q13.12 [CytoView hg38]
ImmunoBaseENSG00000284065
genome Data Viewer NCBIMIR6887 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR6887
Alternative Splicing GalleryENSG00000284065
Gene ExpressionMIR6887 [ NCBI-GEO ]   MIR6887 [ EBI - ARRAY_EXPRESS ]   MIR6887 [ SEEK ]   MIR6887 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR6887 [ Firebrowse - Broad ]
GenevisibleExpression of MIR6887 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)102466205
GTEX Portal (Tissue expression)MIR6887
Human Protein AtlasENSG00000284065-MIR6887 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR6887
Blocks (Seattle)MIR6887
Human Protein Atlas [tissue]ENSG00000284065-MIR6887 [tissue]
Protein Interaction databases
BioGRIDMIR6887
STRING (EMBL)MIR6887
ZODIACMIR6887
Ontologies - Pathways
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR6887
EVEXMIR6887
GoPubMedMIR6887
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Sat Dec 5 17:17:11 CET 2020
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