Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR8080 (microRNA 8080)

Identity

Alias_symbol (synonym)hsa-mir-8080
Other alias
HGNC (Hugo) MIR8080
LocusID (NCBI) 102465877
Atlas_Id 70281
Location 2p12  [Link to chromosome band 2p12]
Location_base_pair Starts at 79866495 and ends at 79866583 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR8080   49989
Cards
Entrez_Gene (NCBI)MIR8080  102465877  microRNA 8080
Aliaseshsa-mir-8080
GeneCards (Weizmann)MIR8080
Ensembl hg19 (Hinxton)ENSG00000276917 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000276917 [Gene_View]  chr2:79866495-79866583 [Contig_View]  MIR8080 [Vega]
ICGC DataPortalENSG00000276917
TCGA cBioPortalMIR8080
AceView (NCBI)MIR8080
Genatlas (Paris)MIR8080
WikiGenes102465877
SOURCE (Princeton)MIR8080
Genetics Home Reference (NIH)MIR8080
miRBaseMIR8080
dbDEMCMIR8080
Genomic and cartography
GoldenPath hg38 (UCSC)MIR8080  -     chr2:79866495-79866583 -  2p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR8080  -     2p12   [Description]    (hg19-Feb_2009)
EnsemblMIR8080 - 2p12 [CytoView hg19]  MIR8080 - 2p12 [CytoView hg38]
Mapping of homologs : NCBIMIR8080 [Mapview hg19]  MIR8080 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR8080
Alternative Splicing GalleryENSG00000276917
Gene ExpressionMIR8080 [ NCBI-GEO ]   MIR8080 [ EBI - ARRAY_EXPRESS ]   MIR8080 [ SEEK ]   MIR8080 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR8080 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102465877
GTEX Portal (Tissue expression)ĶIR80x0<-A>
Human Protein AtlasENSG00000276917-MIR8080 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR8080
DMDM Disease mutations102465877
Blocks (Seattle)MIR8080
Human Protein Atlas [tissue]ENSG00000276917-MIR8080 [tissue]
Protein Interaction databases
FunCoupENSG00000276917
BioGRIDMIR8080
STRING (EMBL)MIR8080
ZODIACMIR8080
Ontologies - Pathways
Huge Navigator MIR8080 [HugePedia]
snp3D : Map Gene to Disease102465877
BioCentury BCIQMIR8080
ClinGenMIR8080
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102465877
Clinical trialMIR8080
Miscellaneous
canSAR (ICR)MIR8080 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR8080
EVEXMIR8080
GoPubMedMIR8080
iHOPMIR8080
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:17:17 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.