Atlas of Genetics and Cytogenetics in Oncology and Haematology

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MIR96 (microRNA 96)

Identity

Alias_namesMIRN96
DFNA50
deafness
Alias_symbol (synonym)hsa-mir-96
Other aliasmiR-96
miRNA96
HGNC (Hugo) MIR96
LocusID (NCBI) 407053
Atlas_Id 51662
Location 7q32.2  [Link to chromosome band 7q32]
Location_base_pair Starts at 129774693 and ends at 129774769 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MIR96   31648
Cards
Entrez_Gene (NCBI)MIR96  407053  microRNA 96
AliasesDFNA50; MIRN96; hsa-mir-96; miR-96; 
miRNA96
GeneCards (Weizmann)MIR96
Ensembl hg19 (Hinxton)ENSG00000199158 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000199158 [Gene_View]  ENSG00000199158 [Sequence]  chr7:129774693-129774769 [Contig_View]  MIR96 [Vega]
ICGC DataPortalENSG00000199158
TCGA cBioPortalMIR96
AceView (NCBI)MIR96
Genatlas (Paris)MIR96
WikiGenes407053
SOURCE (Princeton)MIR96
Genetics Home Reference (NIH)MIR96
miRBaseMIR96
dbDEMCMIR96
Genomic and cartography
GoldenPath hg38 (UCSC)MIR96  -     chr7:129774693-129774769 -  7q32.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR96  -     7q32.2   [Description]    (hg19-Feb_2009)
GoldenPathMIR96 - 7q32.2 [CytoView hg19]  MIR96 - 7q32.2 [CytoView hg38]
ImmunoBaseENSG00000199158
Mapping of homologs : NCBIMIR96 [Mapview hg19]  MIR96 [Mapview hg38]
OMIM611606   613074   
Gene and transcription
Genbank (Entrez)AF480534 AF480568 LM608185
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR96
Alternative Splicing GalleryENSG00000199158
Gene ExpressionMIR96 [ NCBI-GEO ]   MIR96 [ EBI - ARRAY_EXPRESS ]   MIR96 [ SEEK ]   MIR96 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR96 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)407053
GTEX Portal (Tissue expression)MIR96
Human Protein AtlasENSG00000199158-MIR96 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR96
DMDM Disease mutations407053
Blocks (Seattle)MIR96
Human Protein Atlas [tissue]ENSG00000199158-MIR96 [tissue]
Protein Interaction databases
FunCoupENSG00000199158
BioGRIDMIR96
STRING (EMBL)MIR96
ZODIACMIR96
Ontologies - Pathways
Huge Navigator MIR96 [HugePedia]
snp3D : Map Gene to Disease407053
BioCentury BCIQMIR96
ClinGenMIR96
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD407053
Chemical/Pharm GKB GenePA164723022
Clinical trialMIR96
Miscellaneous
canSAR (ICR)MIR96 (select the gene name)
DataMed IndexMIR96
Probes
Litterature
PubMed94 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR96
EVEXMIR96
GoPubMedMIR96
iHOPMIR96
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Aug 12 15:45:11 CEST 2019
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