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MIR99AHG (mir-99a-let-7c cluster host gene)

Identity

Alias_namesC21orf35
FLJ38295
C21orf34
LINC00478
chromosome 21 open reading frame 35
chromosome 21 open reading frame 34
long intergenic non-protein coding RNA 478
mir-99a-let-7c cluster host gene (non-protein coding)
Alias_symbol (synonym)MONC
Other alias
HGNC (Hugo) MIR99AHG
LocusID (NCBI) 388815
Atlas_Id 55314
Location 21q21.1  [Link to chromosome band 21q21]
Location_base_pair Starts at 17442842 and ends at 17982094 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
MIR99AHG (21q21.1) / KLHL7 (7p15.3)MIR99AHG (21q21.1) / LTBP1 (2p22.3)MIR99AHG (21q21.1) / MIR99AHG (21q21.1)
MIR99AHG (21q21.1) / SACM1L (3p21.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR99AHG   1274
Cards
Entrez_Gene (NCBI)MIR99AHG  388815  mir-99a-let-7c cluster host gene
AliasesC21orf34; C21orf35; LINC00478; MONC
GeneCards (Weizmann)MIR99AHG
Ensembl hg19 (Hinxton)ENSG00000215386 [Gene_View]  chr21:17442842-17982094 [Contig_View]  MIR99AHG [Vega]
Ensembl hg38 (Hinxton)ENSG00000215386 [Gene_View]  chr21:17442842-17982094 [Contig_View]  MIR99AHG [Vega]
ICGC DataPortalENSG00000215386
TCGA cBioPortalMIR99AHG
AceView (NCBI)MIR99AHG
Genatlas (Paris)MIR99AHG
WikiGenes388815
SOURCE (Princeton)MIR99AHG
Genetics Home Reference (NIH)MIR99AHG
miRBaseMIR99AHG
dbDEMCMIR99AHG
Genomic and cartography
GoldenPath hg19 (UCSC)MIR99AHG  -     chr21:17442842-17982094 +  21q21.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR99AHG  -     21q21.1   [Description]    (hg38-Dec_2013)
EnsemblMIR99AHG - 21q21.1 [CytoView hg19]  MIR99AHG - 21q21.1 [CytoView hg38]
Mapping of homologs : NCBIMIR99AHG [Mapview hg19]  MIR99AHG [Mapview hg38]
OMIM615964   
Gene and transcription
Genbank (Entrez)AF486622 AK095614 AL700268 BC130602 BC130606
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000021 NC_018932 NT_011512 NW_004929426
Consensus coding sequences : CCDS (NCBI)MIR99AHG
Cluster EST : UnigeneHs.473394 [ NCBI ]
CGAP (NCI)Hs.473394
Alternative Splicing GalleryENSG00000215386
Gene ExpressionMIR99AHG [ NCBI-GEO ]   MIR99AHG [ EBI - ARRAY_EXPRESS ]   MIR99AHG [ SEEK ]   MIR99AHG [ MEM ]
Gene Expression Viewer (FireBrowse)MIR99AHG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)388815
GTEX Portal (Tissue expression)MIR99AHG
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR99AHG
DMDM Disease mutations388815
Blocks (Seattle)MIR99AHG
Human Protein AtlasENSG00000215386
HPRD10746
IPIIPI00478724   IPI00236078   IPI00477869   
Protein Interaction databases
FunCoupENSG00000215386
BioGRIDMIR99AHG
STRING (EMBL)MIR99AHG
ZODIACMIR99AHG
Ontologies - Pathways
Huge Navigator MIR99AHG [HugePedia]
snp3D : Map Gene to Disease388815
BioCentury BCIQMIR99AHG
ClinGenMIR99AHG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD388815
Chemical/Pharm GKB GenePA25829
Clinical trialMIR99AHG
Miscellaneous
canSAR (ICR)MIR99AHG (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR99AHG
EVEXMIR99AHG
GoPubMedMIR99AHG
iHOPMIR99AHG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 13:16:58 CET 2017

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