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MLANA (melan-A)

Identity

Alias (NCBI)MART-1
MART1
HGNC (Hugo) MLANA
HGNC Alias symbMART1
LocusID (NCBI) 2315
Atlas_Id 41373
Location 9p24.1  [Link to chromosome band 9p24]
Location_base_pair Starts at 5890889 and ends at 5910606 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MLANA (9p24.1) / RPTOR (17q25.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MLANA   7124
Cards
Entrez_Gene (NCBI)MLANA    melan-A
AliasesMART-1; MART1
GeneCards (Weizmann)MLANA
Ensembl hg19 (Hinxton)ENSG00000120215 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000120215 [Gene_View]  ENSG00000120215 [Sequence]  chr9:5890889-5910606 [Contig_View]  MLANA [Vega]
ICGC DataPortalENSG00000120215
TCGA cBioPortalMLANA
AceView (NCBI)MLANA
Genatlas (Paris)MLANA
SOURCE (Princeton)MLANA
Genetics Home Reference (NIH)MLANA
Genomic and cartography
GoldenPath hg38 (UCSC)MLANA  -     chr9:5890889-5910606 +  9p24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MLANA  -     9p24.1   [Description]    (hg19-Feb_2009)
GoldenPathMLANA - 9p24.1 [CytoView hg19]  MLANA - 9p24.1 [CytoView hg38]
ImmunoBaseENSG00000120215
genome Data Viewer NCBIMLANA [Mapview hg19]  
OMIM605513   
Gene and transcription
Genbank (Entrez)AK312149 BC014423 CR450299 GQ900930 GQ900964
RefSeq transcript (Entrez)NM_005511
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MLANA
Alternative Splicing GalleryENSG00000120215
Gene ExpressionMLANA [ NCBI-GEO ]   MLANA [ EBI - ARRAY_EXPRESS ]   MLANA [ SEEK ]   MLANA [ MEM ]
Gene Expression Viewer (FireBrowse)MLANA [ Firebrowse - Broad ]
GenevisibleExpression of MLANA in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2315
GTEX Portal (Tissue expression)MLANA
Human Protein AtlasENSG00000120215-MLANA [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ16655   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ16655  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ16655
Splice isoforms : SwissVarQ16655
PhosPhoSitePlusQ16655
Domains : Interpro (EBI)MLANA   
Domain families : Pfam (Sanger)MLANA (PF14991)   
Domain families : Pfam (NCBI)pfam14991   
Conserved Domain (NCBI)MLANA
Blocks (Seattle)MLANA
PDB (RSDB)2GT9    2GTW    2GTZ    2GUO    3HG1    3L6F    3MRO    3MRP    3MRQ    3QDM    3QEQ    3QFD    4EUP    4JFF    4L3E    4QOK    4WJ5    5E9D    5NHT    5NQK    6D78    6DKP   
PDB Europe2GT9    2GTW    2GTZ    2GUO    3HG1    3L6F    3MRO    3MRP    3MRQ    3QDM    3QEQ    3QFD    4EUP    4JFF    4L3E    4QOK    4WJ5    5E9D    5NHT    5NQK    6D78    6DKP   
PDB (PDBSum)2GT9    2GTW    2GTZ    2GUO    3HG1    3L6F    3MRO    3MRP    3MRQ    3QDM    3QEQ    3QFD    4EUP    4JFF    4L3E    4QOK    4WJ5    5E9D    5NHT    5NQK    6D78    6DKP   
PDB (IMB)2GT9    2GTW    2GTZ    2GUO    3HG1    3L6F    3MRO    3MRP    3MRQ    3QDM    3QEQ    3QFD    4EUP    4JFF    4L3E    4QOK    4WJ5    5E9D    5NHT    5NQK    6D78    6DKP   
Structural Biology KnowledgeBase2GT9    2GTW    2GTZ    2GUO    3HG1    3L6F    3MRO    3MRP    3MRQ    3QDM    3QEQ    3QFD    4EUP    4JFF    4L3E    4QOK    4WJ5    5E9D    5NHT    5NQK    6D78    6DKP   
SCOP (Structural Classification of Proteins)2GT9    2GTW    2GTZ    2GUO    3HG1    3L6F    3MRO    3MRP    3MRQ    3QDM    3QEQ    3QFD    4EUP    4JFF    4L3E    4QOK    4WJ5    5E9D    5NHT    5NQK    6D78    6DKP   
CATH (Classification of proteins structures)2GT9    2GTW    2GTZ    2GUO    3HG1    3L6F    3MRO    3MRP    3MRQ    3QDM    3QEQ    3QFD    4EUP    4JFF    4L3E    4QOK    4WJ5    5E9D    5NHT    5NQK    6D78    6DKP   
SuperfamilyQ16655
Human Protein Atlas [tissue]ENSG00000120215-MLANA [tissue]
Peptide AtlasQ16655
HPRD09269
IPIIPI00003426   
Protein Interaction databases
DIP (DOE-UCLA)Q16655
IntAct (EBI)Q16655
BioGRIDMLANA
STRING (EMBL)MLANA
ZODIACMLANA
Ontologies - Pathways
QuickGOQ16655
Ontology : AmiGOprotein binding  endoplasmic reticulum membrane  endoplasmic reticulum membrane  Golgi apparatus  trans-Golgi network  trans-Golgi network  integral component of plasma membrane  melanosome  melanosome  
Ontology : EGO-EBIprotein binding  endoplasmic reticulum membrane  endoplasmic reticulum membrane  Golgi apparatus  trans-Golgi network  trans-Golgi network  integral component of plasma membrane  melanosome  melanosome  
NDEx NetworkMLANA
Atlas of Cancer Signalling NetworkMLANA
Wikipedia pathwaysMLANA
Orthology - Evolution
OrthoDB2315
GeneTree (enSembl)ENSG00000120215
Phylogenetic Trees/Animal Genes : TreeFamMLANA
HOGENOMQ16655
Homologs : HomoloGeneMLANA
Homology/Alignments : Family Browser (UCSC)MLANA
Gene fusions - Rearrangements
Fusion : QuiverMLANA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMLANA [hg38]
dbVarMLANA
ClinVarMLANA
MonarchMLANA
1000_GenomesMLANA 
Exome Variant ServerMLANA
GNOMAD BrowserENSG00000120215
Varsome BrowserMLANA
Genomic Variants (DGV)MLANA [DGVbeta]
DECIPHERMLANA [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMLANA 
Mutations
ICGC Data PortalMLANA 
TCGA Data PortalMLANA 
Broad Tumor PortalMLANA
OASIS PortalMLANA [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMLANA  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DMLANA
Mutations and Diseases : HGMDMLANA
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MLANA
DgiDB (Drug Gene Interaction Database)MLANA
DoCM (Curated mutations)MLANA (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MLANA (select a term)
intoGenMLANA
Cancer3DMLANA(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605513   
Orphanet
DisGeNETMLANA
MedgenMLANA
Genetic Testing Registry MLANA
NextProtQ16655 [Medical]
GENETestsMLANA
Target ValidationMLANA
Huge Navigator MLANA [HugePedia]
ClinGenMLANA
Clinical trials, drugs, therapy
MyCancerGenomeMLANA
Protein Interactions : CTD
Pharm GKB GenePA30842
PharosQ16655
Clinical trialMLANA
Miscellaneous
canSAR (ICR)MLANA (select the gene name)
HarmonizomeMLANA
DataMed IndexMLANA
Probes
Litterature
PubMed64 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMLANA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Fri Jan 1 18:27:05 CET 2021

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