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MLANA (melan-A)

Identity

Alias_symbol (synonym)MART1
Other aliasMART-1
HGNC (Hugo) MLANA
LocusID (NCBI) 2315
Atlas_Id 41373
Location 9p24.1  [Link to chromosome band 9p24]
Location_base_pair Starts at 5890909 and ends at 5909822 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MLANA (9p24.1) / RPTOR (17q25.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MLANA   7124
Cards
Entrez_Gene (NCBI)MLANA  2315  melan-A
AliasesMART-1; MART1
GeneCards (Weizmann)MLANA
Ensembl hg19 (Hinxton)ENSG00000120215 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000120215 [Gene_View]  chr9:5890909-5909822 [Contig_View]  MLANA [Vega]
ICGC DataPortalENSG00000120215
TCGA cBioPortalMLANA
AceView (NCBI)MLANA
Genatlas (Paris)MLANA
WikiGenes2315
SOURCE (Princeton)MLANA
Genetics Home Reference (NIH)MLANA
Genomic and cartography
GoldenPath hg38 (UCSC)MLANA  -     chr9:5890909-5909822 +  9p24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MLANA  -     9p24.1   [Description]    (hg19-Feb_2009)
EnsemblMLANA - 9p24.1 [CytoView hg19]  MLANA - 9p24.1 [CytoView hg38]
Mapping of homologs : NCBIMLANA [Mapview hg19]  MLANA [Mapview hg38]
OMIM605513   
Gene and transcription
Genbank (Entrez)AK312149 BC014423 CR450299 DQ892257 DQ895459
RefSeq transcript (Entrez)NM_005511
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MLANA
Cluster EST : UnigeneHs.154069 [ NCBI ]
CGAP (NCI)Hs.154069
Alternative Splicing GalleryENSG00000120215
Gene ExpressionMLANA [ NCBI-GEO ]   MLANA [ EBI - ARRAY_EXPRESS ]   MLANA [ SEEK ]   MLANA [ MEM ]
Gene Expression Viewer (FireBrowse)MLANA [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2315
GTEX Portal (Tissue expression)MLANA
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ16655   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ16655  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ16655
Splice isoforms : SwissVarQ16655
PhosPhoSitePlusQ16655
Domains : Interpro (EBI)MLANA   
Domain families : Pfam (Sanger)MLANA (PF14991)   
Domain families : Pfam (NCBI)pfam14991   
Conserved Domain (NCBI)MLANA
DMDM Disease mutations2315
Blocks (Seattle)MLANA
PDB (SRS)2GT9    2GTW    2GTZ    2GUO    3HG1    3L6F    3MRO    3MRP    3MRQ    3QDM    3QEQ    3QFD    4EUP    4JFF    4L3E    4QOK    4WJ5    5E9D   
PDB (PDBSum)2GT9    2GTW    2GTZ    2GUO    3HG1    3L6F    3MRO    3MRP    3MRQ    3QDM    3QEQ    3QFD    4EUP    4JFF    4L3E    4QOK    4WJ5    5E9D   
PDB (IMB)2GT9    2GTW    2GTZ    2GUO    3HG1    3L6F    3MRO    3MRP    3MRQ    3QDM    3QEQ    3QFD    4EUP    4JFF    4L3E    4QOK    4WJ5    5E9D   
PDB (RSDB)2GT9    2GTW    2GTZ    2GUO    3HG1    3L6F    3MRO    3MRP    3MRQ    3QDM    3QEQ    3QFD    4EUP    4JFF    4L3E    4QOK    4WJ5    5E9D   
Structural Biology KnowledgeBase2GT9    2GTW    2GTZ    2GUO    3HG1    3L6F    3MRO    3MRP    3MRQ    3QDM    3QEQ    3QFD    4EUP    4JFF    4L3E    4QOK    4WJ5    5E9D   
SCOP (Structural Classification of Proteins)2GT9    2GTW    2GTZ    2GUO    3HG1    3L6F    3MRO    3MRP    3MRQ    3QDM    3QEQ    3QFD    4EUP    4JFF    4L3E    4QOK    4WJ5    5E9D   
CATH (Classification of proteins structures)2GT9    2GTW    2GTZ    2GUO    3HG1    3L6F    3MRO    3MRP    3MRQ    3QDM    3QEQ    3QFD    4EUP    4JFF    4L3E    4QOK    4WJ5    5E9D   
SuperfamilyQ16655
Human Protein AtlasENSG00000120215
Peptide AtlasQ16655
HPRD09269
IPIIPI00003426   
Protein Interaction databases
DIP (DOE-UCLA)Q16655
IntAct (EBI)Q16655
FunCoupENSG00000120215
BioGRIDMLANA
STRING (EMBL)MLANA
ZODIACMLANA
Ontologies - Pathways
QuickGOQ16655
Ontology : AmiGOprotein binding  endoplasmic reticulum membrane  Golgi apparatus  trans-Golgi network  integral component of plasma membrane  melanosome  
Ontology : EGO-EBIprotein binding  endoplasmic reticulum membrane  Golgi apparatus  trans-Golgi network  integral component of plasma membrane  melanosome  
NDEx NetworkMLANA
Atlas of Cancer Signalling NetworkMLANA
Wikipedia pathwaysMLANA
Orthology - Evolution
OrthoDB2315
GeneTree (enSembl)ENSG00000120215
Phylogenetic Trees/Animal Genes : TreeFamMLANA
HOVERGENQ16655
HOGENOMQ16655
Homologs : HomoloGeneMLANA
Homology/Alignments : Family Browser (UCSC)MLANA
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMLANA [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MLANA
dbVarMLANA
ClinVarMLANA
1000_GenomesMLANA 
Exome Variant ServerMLANA
ExAC (Exome Aggregation Consortium)MLANA (select the gene name)
Genetic variants : HAPMAP2315
Genomic Variants (DGV)MLANA [DGVbeta]
DECIPHERMLANA [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMLANA 
Mutations
ICGC Data PortalMLANA 
TCGA Data PortalMLANA 
Broad Tumor PortalMLANA
OASIS PortalMLANA [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMLANA  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMLANA
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MLANA
DgiDB (Drug Gene Interaction Database)MLANA
DoCM (Curated mutations)MLANA (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MLANA (select a term)
intoGenMLANA
Cancer3DMLANA(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605513   
Orphanet
MedgenMLANA
Genetic Testing Registry MLANA
NextProtQ16655 [Medical]
TSGene2315
GENETestsMLANA
Target ValidationMLANA
Huge Navigator MLANA [HugePedia]
snp3D : Map Gene to Disease2315
BioCentury BCIQMLANA
ClinGenMLANA
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2315
Chemical/Pharm GKB GenePA30842
Clinical trialMLANA
Miscellaneous
canSAR (ICR)MLANA (select the gene name)
Probes
Litterature
PubMed58 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMLANA
EVEXMLANA
GoPubMedMLANA
iHOPMLANA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Aug 1 17:08:00 CEST 2017

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