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MLN (motilin)

Identity

Other alias-
HGNC (Hugo) MLN
LocusID (NCBI) 4295
Atlas_Id 70343
Location 6p21.31  [Link to chromosome band 6p21]
Location_base_pair Starts at 33794672 and ends at 33804016 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MLN   7141
Cards
Entrez_Gene (NCBI)MLN  4295  motilin
Aliases
GeneCards (Weizmann)MLN
Ensembl hg19 (Hinxton)ENSG00000096395 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000096395 [Gene_View]  ENSG00000096395 [Sequence]  chr6:33794672-33804016 [Contig_View]  MLN [Vega]
ICGC DataPortalENSG00000096395
TCGA cBioPortalMLN
AceView (NCBI)MLN
Genatlas (Paris)MLN
WikiGenes4295
SOURCE (Princeton)MLN
Genetics Home Reference (NIH)MLN
Genomic and cartography
GoldenPath hg38 (UCSC)MLN  -     chr6:33794672-33804016 -  6p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MLN  -     6p21.31   [Description]    (hg19-Feb_2009)
EnsemblMLN - 6p21.31 [CytoView hg19]  MLN - 6p21.31 [CytoView hg38]
Mapping of homologs : NCBIMLN [Mapview hg19]  MLN [Mapview hg38]
OMIM158270   
Gene and transcription
Genbank (Entrez)AW014210 BC069675 BC112314 BC143981 HQ258057
RefSeq transcript (Entrez)NM_001040109 NM_001184698 NM_002418
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MLN
Cluster EST : UnigeneHs.2813 [ NCBI ]
CGAP (NCI)Hs.2813
Alternative Splicing GalleryENSG00000096395
Gene ExpressionMLN [ NCBI-GEO ]   MLN [ EBI - ARRAY_EXPRESS ]   MLN [ SEEK ]   MLN [ MEM ]
Gene Expression Viewer (FireBrowse)MLN [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4295
GTEX Portal (Tissue expression)MLN
Human Protein AtlasENSG00000096395-MLN [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP12872   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP12872  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP12872
Splice isoforms : SwissVarP12872
PhosPhoSitePlusP12872
Domains : Interpro (EBI)Motilin_assoc    Motilin_ghrelin    Promotilin   
Domain families : Pfam (Sanger)Motilin_assoc (PF04643)    Motilin_ghrelin (PF04644)   
Domain families : Pfam (NCBI)pfam04643    pfam04644   
Conserved Domain (NCBI)MLN
DMDM Disease mutations4295
Blocks (Seattle)MLN
PDB (SRS)1LBJ   
PDB (PDBSum)1LBJ   
PDB (IMB)1LBJ   
PDB (RSDB)1LBJ   
Structural Biology KnowledgeBase1LBJ   
SCOP (Structural Classification of Proteins)1LBJ   
CATH (Classification of proteins structures)1LBJ   
SuperfamilyP12872
Human Protein Atlas [tissue]ENSG00000096395-MLN [tissue]
Peptide AtlasP12872
HPRD15931
IPIIPI00025878   IPI00965489   IPI00746091   
Protein Interaction databases
DIP (DOE-UCLA)P12872
IntAct (EBI)P12872
FunCoupENSG00000096395
BioGRIDMLN
STRING (EMBL)MLN
ZODIACMLN
Ontologies - Pathways
QuickGOP12872
Ontology : AmiGOreceptor binding  hormone activity  extracellular region  G-protein coupled receptor signaling pathway  cell-cell signaling  
Ontology : EGO-EBIreceptor binding  hormone activity  extracellular region  G-protein coupled receptor signaling pathway  cell-cell signaling  
Pathways : KEGGNeuroactive ligand-receptor interaction   
NDEx NetworkMLN
Atlas of Cancer Signalling NetworkMLN
Wikipedia pathwaysMLN
Orthology - Evolution
OrthoDB4295
GeneTree (enSembl)ENSG00000096395
Phylogenetic Trees/Animal Genes : TreeFamMLN
HOVERGENP12872
HOGENOMP12872
Homologs : HomoloGeneMLN
Homology/Alignments : Family Browser (UCSC)MLN
Gene fusions - Rearrangements
Fusion : QuiverMLN
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMLN [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MLN
dbVarMLN
ClinVarMLN
1000_GenomesMLN 
Exome Variant ServerMLN
ExAC (Exome Aggregation Consortium)ENSG00000096395
GNOMAD BrowserENSG00000096395
Varsome BrowserMLN
Genetic variants : HAPMAP4295
Genomic Variants (DGV)MLN [DGVbeta]
DECIPHERMLN [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMLN 
Mutations
ICGC Data PortalMLN 
TCGA Data PortalMLN 
Broad Tumor PortalMLN
OASIS PortalMLN [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMLN  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMLN
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MLN
DgiDB (Drug Gene Interaction Database)MLN
DoCM (Curated mutations)MLN (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MLN (select a term)
intoGenMLN
Cancer3DMLN(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM158270   
Orphanet
DisGeNETMLN
MedgenMLN
Genetic Testing Registry MLN
NextProtP12872 [Medical]
TSGene4295
GENETestsMLN
Target ValidationMLN
Huge Navigator MLN [HugePedia]
snp3D : Map Gene to Disease4295
BioCentury BCIQMLN
ClinGenMLN
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4295
Chemical/Pharm GKB GenePA30856
Clinical trialMLN
Miscellaneous
canSAR (ICR)MLN (select the gene name)
Probes
Litterature
PubMed29 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMLN
EVEXMLN
GoPubMedMLN
iHOPMLN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:18:04 CEST 2018

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