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MLNR (motilin receptor)

Identity

Alias_namesGPR38
G protein-coupled receptor 38
Other aliasMTLR1
HGNC (Hugo) MLNR
LocusID (NCBI) 2862
Atlas_Id 70344
Location 13q14.2  [Link to chromosome band 13q14]
Location_base_pair Starts at 49794474 and ends at 49796513 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MLNR   4495
Cards
Entrez_Gene (NCBI)MLNR  2862  motilin receptor
AliasesGPR38; MTLR1
GeneCards (Weizmann)MLNR
Ensembl hg19 (Hinxton)ENSG00000102539 [Gene_View]  chr13:49794474-49796513 [Contig_View]  MLNR [Vega]
Ensembl hg38 (Hinxton)ENSG00000102539 [Gene_View]  chr13:49794474-49796513 [Contig_View]  MLNR [Vega]
ICGC DataPortalENSG00000102539
TCGA cBioPortalMLNR
AceView (NCBI)MLNR
Genatlas (Paris)MLNR
WikiGenes2862
SOURCE (Princeton)MLNR
Genetics Home Reference (NIH)MLNR
Genomic and cartography
GoldenPath hg19 (UCSC)MLNR  -     chr13:49794474-49796513 +  13q14.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MLNR  -     13q14.2   [Description]    (hg38-Dec_2013)
EnsemblMLNR - 13q14.2 [CytoView hg19]  MLNR - 13q14.2 [CytoView hg38]
Mapping of homologs : NCBIMLNR [Mapview hg19]  MLNR [Mapview hg38]
OMIM602885   
Gene and transcription
Genbank (Entrez)AY603964 BC148475
RefSeq transcript (Entrez)NM_001507
RefSeq genomic (Entrez)NC_000013 NC_018924 NG_029790 NT_024524 NW_004929388
Consensus coding sequences : CCDS (NCBI)MLNR
Cluster EST : UnigeneHs.248126 [ NCBI ]
CGAP (NCI)Hs.248126
Alternative Splicing GalleryENSG00000102539
Gene ExpressionMLNR [ NCBI-GEO ]   MLNR [ EBI - ARRAY_EXPRESS ]   MLNR [ SEEK ]   MLNR [ MEM ]
Gene Expression Viewer (FireBrowse)MLNR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)2862
GTEX Portal (Tissue expression)MLNR
Protein : pattern, domain, 3D structure
UniProt/SwissProtO43193   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO43193  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO43193
Splice isoforms : SwissVarO43193
PhosPhoSitePlusO43193
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GHS-R    GPCR_Rhodpsn    GPCR_Rhodpsn_7TM   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)MLNR
DMDM Disease mutations2862
Blocks (Seattle)MLNR
SuperfamilyO43193
Human Protein AtlasENSG00000102539
Peptide AtlasO43193
HPRD04197
IPIIPI00011240   IPI00219128   
Protein Interaction databases
DIP (DOE-UCLA)O43193
IntAct (EBI)O43193
FunCoupENSG00000102539
BioGRIDMLNR
STRING (EMBL)MLNR
ZODIACMLNR
Ontologies - Pathways
QuickGOO43193
Ontology : AmiGOG-protein coupled receptor activity  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  digestion  growth hormone-releasing hormone receptor activity  
Ontology : EGO-EBIG-protein coupled receptor activity  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  digestion  growth hormone-releasing hormone receptor activity  
Pathways : KEGGNeuroactive ligand-receptor interaction   
NDEx NetworkMLNR
Atlas of Cancer Signalling NetworkMLNR
Wikipedia pathwaysMLNR
Orthology - Evolution
OrthoDB2862
GeneTree (enSembl)ENSG00000102539
Phylogenetic Trees/Animal Genes : TreeFamMLNR
HOVERGENO43193
HOGENOMO43193
Homologs : HomoloGeneMLNR
Homology/Alignments : Family Browser (UCSC)MLNR
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMLNR [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MLNR
dbVarMLNR
ClinVarMLNR
1000_GenomesMLNR 
Exome Variant ServerMLNR
ExAC (Exome Aggregation Consortium)MLNR (select the gene name)
Genetic variants : HAPMAP2862
Genomic Variants (DGV)MLNR [DGVbeta]
DECIPHER (Syndromes)13:49794474-49796513  ENSG00000102539
CONAN: Copy Number AnalysisMLNR 
Mutations
ICGC Data PortalMLNR 
TCGA Data PortalMLNR 
Broad Tumor PortalMLNR
OASIS PortalMLNR [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMLNR  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMLNR
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MLNR
DgiDB (Drug Gene Interaction Database)MLNR
DoCM (Curated mutations)MLNR (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MLNR (select a term)
intoGenMLNR
Cancer3DMLNR(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602885   
Orphanet
MedgenMLNR
Genetic Testing Registry MLNR
NextProtO43193 [Medical]
TSGene2862
GENETestsMLNR
Huge Navigator MLNR [HugePedia]
snp3D : Map Gene to Disease2862
BioCentury BCIQMLNR
ClinGenMLNR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD2862
Chemical/Pharm GKB GenePA28884
Clinical trialMLNR
Miscellaneous
canSAR (ICR)MLNR (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMLNR
EVEXMLNR
GoPubMedMLNR
iHOPMLNR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:33:21 CET 2017

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